Literature DB >> 18977752

Translation initiation factor 4B homodimerization, RNA binding, and interaction with Poly(A)-binding protein are enhanced by zinc.

Shijun Cheng1, Shemaila Sultana, Dixie J Goss, Daniel R Gallie.   

Abstract

The eukaryotic translation initiation factor (eIF) 4B promotes the RNA-dependent ATP hydrolysis activity and ATP-dependent RNA helicase activity of eIF4A and eIF4F during translation initiation. eIF4B also helps to organize the assembly of the translational machinery through its interactions with eIF4A, eIF4G, eIF3, the poly(A)-binding protein (PABP), and RNA. Although the function of eIF4B is conserved among plants, animals, and yeast, eIF4B is one of the least conserved of initiation factors at the sequence level. Mammalian eIF4B is a constitutive dimer; however, conflicting reports have suggested that plant eIF4B may exist as a monomer or a dimer. In this study, we show that eIF4B from wheat can form a dimer and we identify the region responsible for its dimerization. Zinc stimulated homodimerization of eIF4B and bound eIF4B with a Kd of 19.7 nM. Zinc increased the activity of the eIF4B C-terminal RNA-binding domain specifically. Zinc promoted the interaction between eIF4B and PABP but not the interaction between eIF4B and eIF4A or eIFiso4G, demonstrating that the effect of zinc was highly specific. The interaction between PABP and eIFiso4G was also stimulated by zinc but required significantly higher levels of zinc. Interestingly zinc abolished the ability of eIFiso4G to compete with eIF4B in binding to their overlapping binding sites in PABP by preferentially promoting the interaction between eIF4B and PABP. Our observations suggest that wheat eIF4B can dimerize but requires zinc. Moreover zinc controls the partner protein selection of PABP such that the interaction with eIF4B is preferred over eIFiso4G.

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Year:  2008        PMID: 18977752      PMCID: PMC2662292          DOI: 10.1074/jbc.M807716200

Source DB:  PubMed          Journal:  J Biol Chem        ISSN: 0021-9258            Impact factor:   5.157


  22 in total

Review 1.  Starting the protein synthesis machine: eukaryotic translation initiation.

Authors:  Thomas Preiss; Matthias W Hentze
Journal:  Bioessays       Date:  2003-12       Impact factor: 4.345

Review 2.  Protein-protein interactions required during translation.

Authors:  Daniel R Gallie
Journal:  Plant Mol Biol       Date:  2002-12       Impact factor: 4.076

3.  Wheat eukaryotic initiation factor 4B organizes assembly of RNA and eIFiso4G, eIF4A, and poly(A)-binding protein.

Authors:  Shijun Cheng; Daniel R Gallie
Journal:  J Biol Chem       Date:  2006-06-27       Impact factor: 5.157

4.  The phosphorylation state of poly(A)-binding protein specifies its binding to poly(A) RNA and its interaction with eukaryotic initiation factor (eIF) 4F, eIFiso4F, and eIF4B.

Authors:  H Le; K S Browning; D R Gallie
Journal:  J Biol Chem       Date:  2000-06-09       Impact factor: 5.157

5.  Wheat germ translation initiation factor eIF4B affects eIF4A and eIFiso4F helicase activity by increasing the ATP binding affinity of eIF4A.

Authors:  X Bi; J Ren; D J Goss
Journal:  Biochemistry       Date:  2000-05-16       Impact factor: 3.162

6.  Modulation of the helicase activity of eIF4A by eIF4B, eIF4H, and eIF4F.

Authors:  G W Rogers; N J Richter; W F Lima; W C Merrick
Journal:  J Biol Chem       Date:  2001-06-19       Impact factor: 5.157

7.  Translation initiation factors eIF-iso4G and eIF-4B interact with the poly(A)-binding protein and increase its RNA binding activity.

Authors:  H Le; R L Tanguay; M L Balasta; C C Wei; K S Browning; A M Metz; D J Goss; D R Gallie
Journal:  J Biol Chem       Date:  1997-06-27       Impact factor: 5.157

8.  Wheat germ poly(A) binding protein enhances the binding affinity of eukaryotic initiation factor 4F and (iso)4F for cap analogues.

Authors:  C C Wei; M L Balasta; J Ren; D J Goss
Journal:  Biochemistry       Date:  1998-02-17       Impact factor: 3.162

9.  Eukaryotic initiation factor 4B from wheat and Arabidopsis thaliana is a member of a multigene family.

Authors:  A M Metz; K C Wong; S A Malmström; K S Browning
Journal:  Biochem Biophys Res Commun       Date:  1999-12-20       Impact factor: 3.575

10.  eIF4G, eIFiso4G, and eIF4B bind the poly(A)-binding protein through overlapping sites within the RNA recognition motif domains.

Authors:  Shijun Cheng; Daniel R Gallie
Journal:  J Biol Chem       Date:  2007-07-02       Impact factor: 5.157

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  5 in total

Review 1.  A mechanistic overview of translation initiation in eukaryotes.

Authors:  Colin Echeverría Aitken; Jon R Lorsch
Journal:  Nat Struct Mol Biol       Date:  2012-06-05       Impact factor: 15.369

Review 2.  The role of the poly(A) binding protein in the assembly of the Cap-binding complex during translation initiation in plants.

Authors:  Daniel R Gallie
Journal:  Translation (Austin)       Date:  2014-10-30

3.  Mechanism of cytoplasmic mRNA translation.

Authors:  Karen S Browning; Julia Bailey-Serres
Journal:  Arabidopsis Book       Date:  2015-04-24

4.  Evidence for variation in the optimal translation initiation complex: plant eIF4B, eIF4F, and eIF(iso)4F differentially promote translation of mRNAs.

Authors:  Laura K Mayberry; M Leah Allen; Michael D Dennis; Karen S Browning
Journal:  Plant Physiol       Date:  2009-06-03       Impact factor: 8.340

5.  Eukaryotic initiation factor 4B and the poly(A)-binding protein bind eIF4G competitively.

Authors:  Shijun Cheng; Daniel R Gallie
Journal:  Translation (Austin)       Date:  2013-04-01
  5 in total

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