Literature DB >> 18976726

The distribution of mitochondrial DNA heteroplasmy due to random genetic drift.

Passorn Wonnapinij1, Patrick F Chinnery, David C Samuels.   

Abstract

Cells containing pathogenic mutations in mitochondrial DNA (mtDNA) generally also contain the wild-type mtDNA, a condition called heteroplasmy. The amount of mutant mtDNA in a cell, called the heteroplasmy level, is an important factor in determining the amount of mitochondrial dysfunction and therefore the disease severity. mtDNA is inherited maternally, and there are large random shifts in heteroplasmy level between mother and offspring. Understanding the distribution in heteroplasmy levels across a group of offspring is an important step in understanding the inheritance of diseases caused by mtDNA mutations. Previously, our understanding of the heteroplasmy distribution has been limited to just the mean and variance of the distribution. Here we give equations, adapted from the work of Kimura on random genetic drift, for the full mtDNA heteroplasmy distribution. We describe how to use the Kimura distribution in mitochondrial genetics, and we test the Kimura distribution against human, mouse, and Drosophila data sets.

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Year:  2008        PMID: 18976726      PMCID: PMC2668051          DOI: 10.1016/j.ajhg.2008.10.007

Source DB:  PubMed          Journal:  Am J Hum Genet        ISSN: 0002-9297            Impact factor:   11.025


  29 in total

Review 1.  The inheritance of genes in mitochondria and chloroplasts: laws, mechanisms, and models.

Authors:  C W Birky
Journal:  Annu Rev Genet       Date:  2001       Impact factor: 16.830

2.  An ND-6 mitochondrial DNA mutation associated with Leber hereditary optic neuropathy.

Authors:  D R Johns; M J Neufeld; R D Park
Journal:  Biochem Biophys Res Commun       Date:  1992-09-30       Impact factor: 3.575

3.  Genetic variability and effective population size when local extinction and recolonization of subpopulations are frequent.

Authors:  T Maruyama; M Kimura
Journal:  Proc Natl Acad Sci U S A       Date:  1980-11       Impact factor: 11.205

4.  A mutation in the tRNA(Leu)(UUR) gene associated with the MELAS subgroup of mitochondrial encephalomyopathies.

Authors:  Y Goto; I Nonaka; S Horai
Journal:  Nature       Date:  1990-12-13       Impact factor: 49.962

5.  A new mitochondrial disease associated with mitochondrial DNA heteroplasmy.

Authors:  I J Holt; A E Harding; R K Petty; J A Morgan-Hughes
Journal:  Am J Hum Genet       Date:  1990-03       Impact factor: 11.025

Review 6.  Mitochondrial genetics '98 is the bottleneck cracked?

Authors:  J Poulton; V Macaulay; D R Marchington
Journal:  Am J Hum Genet       Date:  1998-04       Impact factor: 11.025

7.  The generation of transplasmic Drosophila simulans by cytoplasmic injection: effects of segregation and selection on the perpetuation of mitochondrial DNA heteroplasmy.

Authors:  E de Stordeur; M Solignac; M Monnerot; J C Mounolou
Journal:  Mol Gen Genet       Date:  1989-12

8.  Mitochondrial DNA mutation associated with Leber's hereditary optic neuropathy.

Authors:  D C Wallace; G Singh; M T Lott; J A Hodge; T G Schurr; A M Lezza; L J Elsas; E K Nikoskelainen
Journal:  Science       Date:  1988-12-09       Impact factor: 47.728

9.  The inheritance of mitochondrial DNA heteroplasmy: random drift, selection or both?

Authors:  P F Chinnery; D R Thorburn; D C Samuels; S L White; H M Dahl; D M Turnbull; R N Lightowlers; N Howell
Journal:  Trends Genet       Date:  2000-11       Impact factor: 11.639

10.  Leber hereditary optic neuropathy: Does heteroplasmy influence the inheritance and expression of the G11778A mitochondrial DNA mutation?

Authors:  P F Chinnery; R M Andrews; D M Turnbull; N N Howell
Journal:  Am J Med Genet       Date:  2001-01-22
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  29 in total

1.  Reassessing evidence for a postnatal mitochondrial genetic bottleneck.

Authors:  David C Samuels; Passorn Wonnapinij; Lynsey M Cree; Patrick F Chinnery
Journal:  Nat Genet       Date:  2010-06       Impact factor: 38.330

2.  No relationship found between point heteroplasmy in mitochondrial DNA control region and age range, sex and haplogroup in human hairs.

Authors:  Maria Angélica de Camargo; Greiciane G Paneto; Aline C O de Mello; Joyce A Martins; William Barcellos; Regina M B Cicarelli
Journal:  Mol Biol Rep       Date:  2010-06-20       Impact factor: 2.316

Review 3.  Mitochondrial DNA genetics and the heteroplasmy conundrum in evolution and disease.

Authors:  Douglas C Wallace; Dimitra Chalkia
Journal:  Cold Spring Harb Perspect Biol       Date:  2013-11-01       Impact factor: 10.005

4.  Stochastic modelling, Bayesian inference, and new in vivo measurements elucidate the debated mtDNA bottleneck mechanism.

Authors:  Iain G Johnston; Joerg P Burgstaller; Vitezslav Havlicek; Thomas Kolbe; Thomas Rülicke; Gottfried Brem; Jo Poulton; Nick S Jones
Journal:  Elife       Date:  2015-06-02       Impact factor: 8.140

5.  Previous estimates of mitochondrial DNA mutation level variance did not account for sampling error: comparing the mtDNA genetic bottleneck in mice and humans.

Authors:  Passorn Wonnapinij; Patrick F Chinnery; David C Samuels
Journal:  Am J Hum Genet       Date:  2010-04-01       Impact factor: 11.025

6.  Detecting heteroplasmy from high-throughput sequencing of complete human mitochondrial DNA genomes.

Authors:  Mingkun Li; Anna Schönberg; Michael Schaefer; Roland Schroeder; Ivane Nasidze; Mark Stoneking
Journal:  Am J Hum Genet       Date:  2010-08-13       Impact factor: 11.025

Review 7.  Transmission of mitochondrial DNA diseases and ways to prevent them.

Authors:  Joanna Poulton; Marcos R Chiaratti; Flávio V Meirelles; Stephen Kennedy; Dagan Wells; Ian J Holt
Journal:  PLoS Genet       Date:  2010-08-12       Impact factor: 5.917

8.  A Population Phylogenetic View of Mitochondrial Heteroplasmy.

Authors:  Peter R Wilton; Arslan Zaidi; Kateryna Makova; Rasmus Nielsen
Journal:  Genetics       Date:  2018-01-17       Impact factor: 4.562

9.  Very low-level heteroplasmy mtDNA variations are inherited in humans.

Authors:  Yan Guo; Chung-I Li; Quanhu Sheng; Jeanette F Winther; Qiuyin Cai; John D Boice; Yu Shyr
Journal:  J Genet Genomics       Date:  2013-12-08       Impact factor: 4.275

Review 10.  The inheritance of pathogenic mitochondrial DNA mutations.

Authors:  L M Cree; D C Samuels; P F Chinnery
Journal:  Biochim Biophys Acta       Date:  2009-03-19
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