Literature DB >> 1896463

Structure of human beta 1 beta 1 alcohol dehydrogenase: catalytic effects of non-active-site substitutions.

T D Hurley1, W F Bosron, J A Hamilton, L M Amzel.   

Abstract

The three-dimensional structure of human beta 1 beta 1 alcohol dehydrogenase (ADH; EC 1.1.1.1) complexed with NAD+ has been determined by x-ray crystallography to 3.0-A resolution. The amino acids directly involved in coenzyme binding are conserved between horse EE and human beta 1 beta 1 alcohol dehydrogenase in all but one case [serine (horse) vs. threonine (human) at position 48]. As a result, the coenzyme molecule is bound in a similar manner in the two enzymes. However, the strength of the interactions in the vicinity of the pyrophosphate bridge of NAD+ appears to be enhanced in the human enzyme. Side-chain movements of Arg-47 and Asp-50 and a shift in the position of the helix comprising residues 202-212 may explain both the decreased Vmax and the decreased rate of NADH dissociation observed in the human enzyme vs. the horse enzyme. It appears that these catalytic differences are not due to substitutions of any amino acids directly involved in coenzyme binding but are the result of structural rearrangements resulting from multiple sequence differences between the two enzymes.

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Year:  1991        PMID: 1896463      PMCID: PMC52464          DOI: 10.1073/pnas.88.18.8149

Source DB:  PubMed          Journal:  Proc Natl Acad Sci U S A        ISSN: 0027-8424            Impact factor:   11.205


  16 in total

1.  Crystallographic refinement by simulated annealing. Application to a 2.8 A resolution structure of aspartate aminotransferase.

Authors:  A T Brünger
Journal:  J Mol Biol       Date:  1988-10-05       Impact factor: 5.469

2.  Amino acid preferences for specific locations at the ends of alpha helices.

Authors:  J S Richardson; D C Richardson
Journal:  Science       Date:  1988-06-17       Impact factor: 47.728

Review 3.  The role of the alpha-helix dipole in protein function and structure.

Authors:  W G Hol
Journal:  Prog Biophys Mol Biol       Date:  1985       Impact factor: 3.667

4.  Helix signals in proteins.

Authors:  L G Presta; G D Rose
Journal:  Science       Date:  1988-06-17       Impact factor: 47.728

Review 5.  Genetic polymorphism of enzymes of alcohol metabolism and susceptibility to alcoholic liver disease.

Authors:  W F Bosron; L Lumeng; T K Li
Journal:  Mol Aspects Med       Date:  1988

6.  Stereospecific oxidation of secondary alcohols by human alcohol dehydrogenases.

Authors:  C L Stone; T K Li; W F Bosron
Journal:  J Biol Chem       Date:  1989-07-05       Impact factor: 5.157

7.  Computer-graphics interpretations of residue exchanges between the alpha, beta and gamma subunits of human-liver alcohol dehydrogenase class I isozymes.

Authors:  H Eklund; E Horjales; B L Vallee; H Jörnvall
Journal:  Eur J Biochem       Date:  1987-09-01

8.  Crystallographic investigations of nicotinamide adenine dinucleotide binding to horse liver alcohol dehydrogenase.

Authors:  H Eklund; J P Samama; T A Jones
Journal:  Biochemistry       Date:  1984-12-04       Impact factor: 3.162

9.  Structures of human alcohol and aldehyde dehydrogenases.

Authors:  H Jörnvall; J Hempel; B Vallee
Journal:  Enzyme       Date:  1987

10.  Kinetics of native and modified liver alcohol dehydrogenase with coenzyme analogues: isomerization of enzyme-nicotinamide adenine dinucleotide complex.

Authors:  B V Plapp; D C Sogin; R T Dworschack; D P Bohlken; C Woenckhaus; R Jeck
Journal:  Biochemistry       Date:  1986-09-23       Impact factor: 3.162

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  12 in total

1.  Progressive sequence alignment and molecular evolution of the Zn-containing alcohol dehydrogenase family.

Authors:  H W Sun; B V Plapp
Journal:  J Mol Evol       Date:  1992-06       Impact factor: 2.395

2.  Cloning of the putative aldehyde dehydrogenase, aldA, gene from Streptomyces aureofaciens.

Authors:  O Sprusanský; D Homérová; B Sevcíková; J Kormanec
Journal:  Folia Microbiol (Praha)       Date:  1999       Impact factor: 2.099

3.  Pea formaldehyde-active class III alcohol dehydrogenase: common derivation of the plant and animal forms but not of the corresponding ethanol-active forms (classes I and P).

Authors:  J Shafqat; M El-Ahmad; O Danielsson; M C Martínez; B Persson; X Parés; H Jornvall
Journal:  Proc Natl Acad Sci U S A       Date:  1996-05-28       Impact factor: 11.205

4.  Reduction of ethanol consumption in alcohol-preferring rats by dual expression gene transfer.

Authors:  Mario Rivera-Meza; María Elena Quintanilla; Lutske Tampier
Journal:  Alcohol Alcohol       Date:  2012-01-02       Impact factor: 2.826

Review 5.  The Role of Alcohol Dehydrogenase in Drug Metabolism: Beyond Ethanol Oxidation.

Authors:  Li Di; Amanda Balesano; Samantha Jordan; Sophia M Shi
Journal:  AAPS J       Date:  2021-01-07       Impact factor: 4.009

6.  Origin of the human alcohol dehydrogenase system: implications from the structure and properties of the octopus protein.

Authors:  R Kaiser; M R Fernández; X Parés; H Jörnvall
Journal:  Proc Natl Acad Sci U S A       Date:  1993-12-01       Impact factor: 11.205

7.  Fundamental molecular differences between alcohol dehydrogenase classes.

Authors:  O Danielsson; S Atrian; T Luque; L Hjelmqvist; R Gonzàlez-Duarte; H Jörnvall
Journal:  Proc Natl Acad Sci U S A       Date:  1994-05-24       Impact factor: 11.205

8.  The vertebrate alcohol dehydrogenase system: variable class II type form elucidates separate stages of enzymogenesis.

Authors:  L Hjelmqvist; M Estonius; H Jörnvall
Journal:  Proc Natl Acad Sci U S A       Date:  1995-11-21       Impact factor: 11.205

9.  Crystal structure of cod liver class I alcohol dehydrogenase: substrate pocket and structurally variable segments.

Authors:  S Ramaswamy; M el Ahmad; O Danielsson; H Jörnvall; H Eklund
Journal:  Protein Sci       Date:  1996-04       Impact factor: 6.725

10.  Two zebrafish alcohol dehydrogenases share common ancestry with mammalian class I, II, IV, and V alcohol dehydrogenase genes but have distinct functional characteristics.

Authors:  Mark J Reimers; Mark E Hahn; Robert L Tanguay
Journal:  J Biol Chem       Date:  2004-07-01       Impact factor: 5.157

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