Literature DB >> 18959308

Maximum entropy and the state-variable approach to macroecology.

J Harte1, T Zillio, E Conlisk, A B Smith.   

Abstract

The biodiversity scaling metrics widely studied in macroecology include the species-area relationship (SAR), the scale-dependent species-abundance distribution (SAD), the distribution of masses or metabolic energies of individuals within and across species, the abundance-energy or abundance-mass relationship across species, and the species-level occupancy distributions across space. We propose a theoretical framework for predicting the scaling forms of these and other metrics based on the state-variable concept and an analytical method derived from information theory. In statistical physics, a method of inference based on information entropy results in a complete macro-scale description of classical thermodynamic systems in terms of the state variables volume, temperature, and number of molecules. In analogy, we take the state variables of an ecosystem to be its total area, the total number of species within any specified taxonomic group in that area, the total number of individuals across those species, and the summed metabolic energy rate for all those individuals. In terms solely of ratios of those state variables, and without invoking any specific ecological mechanisms, we show that realistic functional forms for the macroecological metrics listed above are inferred based on information entropy. The Fisher log series SAD emerges naturally from the theory. The SAR is predicted to have negative curvature on a log-log plot, but as the ratio of the number of species to the number of individuals decreases, the SAR becomes better and better approximated by a power law, with the predicted slope z in the range of 0.14-0.20. Using the 3/4 power mass-metabolism scaling relation to relate energy requirements and measured body sizes, the Damuth scaling rule relating mass and abundance is also predicted by the theory. We argue that the predicted forms of the macroecological metrics are in reasonable agreement with the patterns observed from plant census data across habitats and spatial scales. While this is encouraging, given the absence of adjustable fitting parameters in the theory, we further argue that even small discrepancies between data and predictions can help identify ecological mechanisms that influence macroecological patterns.

Entities:  

Mesh:

Year:  2008        PMID: 18959308     DOI: 10.1890/07-1369.1

Source DB:  PubMed          Journal:  Ecology        ISSN: 0012-9658            Impact factor:   5.499


  31 in total

1.  Integrating spatial and temporal approaches to understanding species richness.

Authors:  Ethan P White; S K Morgan Ernest; Peter B Adler; Allen H Hurlbert; S Kathleen Lyons
Journal:  Philos Trans R Soc Lond B Biol Sci       Date:  2010-11-27       Impact factor: 6.237

2.  Inferring species interactions in tropical forests.

Authors:  Igor Volkov; Jayanth R Banavar; Stephen P Hubbell; Amos Maritan
Journal:  Proc Natl Acad Sci U S A       Date:  2009-08-04       Impact factor: 11.205

3.  Measurement scale in maximum entropy models of species abundance.

Authors:  S A Frank
Journal:  J Evol Biol       Date:  2011-01-25       Impact factor: 2.411

4.  Estimating biodiversity impacts without field surveys: A case study in northern Borneo.

Authors:  Justin Kitzes; Rebekah Shirley
Journal:  Ambio       Date:  2015-07-14       Impact factor: 5.129

5.  A general framework for predicting delayed responses of ecological communities to habitat loss.

Authors:  Youhua Chen; Tsung-Jen Shen
Journal:  Sci Rep       Date:  2017-04-20       Impact factor: 4.379

6.  Is there an ecological basis for species abundance distributions?

Authors:  Jian D L Yen; James R Thomson; Ralph Mac Nally
Journal:  Oecologia       Date:  2012-09-22       Impact factor: 3.225

7.  What is macroecology?

Authors:  Sally A Keith; Tom J Webb; Katrin Böhning-Gaese; Sean R Connolly; Nicholas K Dulvy; Felix Eigenbrod; Kate E Jones; Trevor Price; David W Redding; Ian P F Owens; Nick J B Isaac
Journal:  Biol Lett       Date:  2012-08-22       Impact factor: 3.703

8.  Habitat suitability model with maximum entropy approach for European roe deer (Capreolus capreolus) in the Black Sea Region.

Authors:  Ozkan Evcin; Omer Kucuk; Emre Akturk
Journal:  Environ Monit Assess       Date:  2019-10-24       Impact factor: 2.513

9.  Can unified theories of biodiversity explain mammalian macroecological patterns?

Authors:  Kate E Jones; Tim M Blackburn; Nick J B Isaac
Journal:  Philos Trans R Soc Lond B Biol Sci       Date:  2011-09-12       Impact factor: 6.237

10.  Biology, methodology or chance? The degree distributions of bipartite ecological networks.

Authors:  Richard J Williams
Journal:  PLoS One       Date:  2011-03-03       Impact factor: 3.240

View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.