Literature DB >> 18956887

NMR solution structure of the neurotrypsin Kringle domain.

Olga A Ozhogina1, Alexander Grishaev, Emile L Bominaar, László Patthy, Maria Trexler, Miguel Llinás.   

Abstract

Neurotrypsin is a multidomain protein that serves as a brain-specific serine protease. Here we report the NMR structure of its kringle domain, NT/K. The data analysis was performed with the BACUS (Bayesian analysis of coupled unassigned spins) algorithm. This study presents the first application of BACUS to the structure determination of a 13C unenriched protein for which no prior experimental 3D structure was available. NT/K adopts the kringle fold, consisting of an antiparallel beta-sheet bridged by an overlapping pair of disulfides. The structure reveals the presence of a surface-exposed left-handed polyproline II helix that is closely packed to the core beta-structure. This feature distinguishes NT/K from other members of the kringle fold and points toward a novel functional role for a kringle domain. Functional divergence among kringle domains is discussed on the basis of their surface and electrostatic characteristics.

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Year:  2008        PMID: 18956887      PMCID: PMC2647577          DOI: 10.1021/bi800555z

Source DB:  PubMed          Journal:  Biochemistry        ISSN: 0006-2960            Impact factor:   3.162


  40 in total

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2.  ABACUS, a direct method for protein NMR structure computation via assembly of fragments.

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Journal:  Science       Date:  2006-02-03       Impact factor: 47.728

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6.  AQUA and PROCHECK-NMR: programs for checking the quality of protein structures solved by NMR.

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7.  Neurotrypsin, a novel multidomain serine protease expressed in the nervous system.

Authors:  T P Gschwend; S R Krueger; S V Kozlov; D P Wolfer; P Sonderegger
Journal:  Mol Cell Neurosci       Date:  1997       Impact factor: 4.314

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  6 in total

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Journal:  Protein Sci       Date:  2019-03-06       Impact factor: 6.725

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3.  Crystal structure of the kringle domain of human receptor tyrosine kinase-like orphan receptor 1 (hROR1).

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4.  Characterization of the kringle fold and identification of a ubiquitous new class of disulfide rotamers.

Authors:  Olga A Ozhogina; Emile L Bominaar
Journal:  J Struct Biol       Date:  2009-06-12       Impact factor: 2.867

5.  The Kringle of Life.

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Journal:  Protein J       Date:  2021-06-16       Impact factor: 2.371

6.  Miguel Llinás and the Structure of the Kringle Fold.

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  6 in total

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