Literature DB >> 18940606

Architecture of the pontin/reptin complex, essential in the assembly of several macromolecular complexes.

Eva Torreira1, Sudhakar Jha, José R López-Blanco, Ernesto Arias-Palomo, Pablo Chacón, Cristina Cañas, Sylvia Ayora, Anindya Dutta, Oscar Llorca.   

Abstract

Pontin and reptin belong to the AAA+ family, and they are essential for the structural integrity and catalytic activity of several chromatin remodeling complexes. They are also indispensable for the assembly of several ribonucleoprotein complexes, including telomerase. Here, we propose a structural model of the yeast pontin/reptin complex based on a cryo-electron microscopy reconstruction at 13 A. Pontin/reptin hetero-dodecamers were purified from in vivo assembled complexes forming a double ring. Two rings interact through flexible domains projecting from each hexamer, constituting an atypical asymmetric form of oligomerization. These flexible domains and the AAA+ cores reveal significant conformational changes when compared with the crystal structure of human pontin that generate enlarged channels. This structure of endogenously assembled pontin/reptin complexes is different than previously described structures, suggesting that pontin and reptin could acquire distinct structural states to regulate their broad functions as molecular motors and scaffolds for nucleic acids and proteins.

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Year:  2008        PMID: 18940606      PMCID: PMC2577609          DOI: 10.1016/j.str.2008.08.009

Source DB:  PubMed          Journal:  Structure        ISSN: 0969-2126            Impact factor:   5.006


  24 in total

1.  Rvb1p and Rvb2p are essential components of a chromatin remodeling complex that regulates transcription of over 5% of yeast genes.

Authors:  Z O Jónsson; S K Dhar; G J Narlikar; R Auty; N Wagle; D Pellman; R E Pratt; R Kingston; A Dutta
Journal:  J Biol Chem       Date:  2001-02-05       Impact factor: 5.157

2.  EMAN: semiautomated software for high-resolution single-particle reconstructions.

Authors:  S J Ludtke; P R Baldwin; W Chiu
Journal:  J Struct Biol       Date:  1999-12-01       Impact factor: 2.867

3.  Crystal structure of the RuvA-RuvB complex: a structural basis for the Holliday junction migrating motor machinery.

Authors:  Kazuhiro Yamada; Tomoko Miyata; Daisuke Tsuchiya; Takuji Oyama; Yoshie Fujiwara; Takayuki Ohnishi; Hiroshi Iwasaki; Hideo Shinagawa; Mariko Ariyoshi; Kouta Mayanagi; Kosuke Morikawa
Journal:  Mol Cell       Date:  2002-09       Impact factor: 17.970

4.  Optimal determination of particle orientation, absolute hand, and contrast loss in single-particle electron cryomicroscopy.

Authors:  Peter B Rosenthal; Richard Henderson
Journal:  J Mol Biol       Date:  2003-10-31       Impact factor: 5.469

5.  The hexameric ring structure of the Escherichia coli RuvB branch migration protein.

Authors:  Yen-Ju Chen; Xiong Yu; Edward H Egelman
Journal:  J Mol Biol       Date:  2002-06-07       Impact factor: 5.469

6.  Accurate determination of local defocus and specimen tilt in electron microscopy.

Authors:  Joseph A Mindell; Nikolaus Grigorieff
Journal:  J Struct Biol       Date:  2003-06       Impact factor: 2.867

Review 7.  The diverse functions of histone acetyltransferase complexes.

Authors:  Michael J Carrozza; Rhea T Utley; Jerry L Workman; Jacques Côté
Journal:  Trends Genet       Date:  2003-06       Impact factor: 11.639

8.  XMIPP: a new generation of an open-source image processing package for electron microscopy.

Authors:  C O S Sorzano; R Marabini; J Velázquez-Muriel; J R Bilbao-Castro; S H W Scheres; J M Carazo; A Pascual-Montano
Journal:  J Struct Biol       Date:  2004-11       Impact factor: 2.867

9.  Human Rvb1/Tip49 is required for the histone acetyltransferase activity of Tip60/NuA4 and for the downregulation of phosphorylation on H2AX after DNA damage.

Authors:  Sudhakar Jha; Etsuko Shibata; Anindya Dutta
Journal:  Mol Cell Biol       Date:  2008-02-19       Impact factor: 4.272

10.  The thermosome: alternating alpha and beta-subunits within the chaperonin of the archaeon Thermoplasma acidophilum.

Authors:  M Nitsch; M Klumpp; A Lupas; W Baumeister
Journal:  J Mol Biol       Date:  1997-03-21       Impact factor: 5.469

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  29 in total

1.  Mechanism of the AAA+ ATPases pontin and reptin in the biogenesis of H/ACA RNPs.

Authors:  Rosario Machado-Pinilla; Dominique Liger; Nicolas Leulliot; U Thomas Meier
Journal:  RNA       Date:  2012-08-24       Impact factor: 4.942

Review 2.  Chaperone-like activity of the AAA+ proteins Rvb1 and Rvb2 in the assembly of various complexes.

Authors:  Nardin Nano; Walid A Houry
Journal:  Philos Trans R Soc Lond B Biol Sci       Date:  2013-03-25       Impact factor: 6.237

3.  RVBs are required for assembling a functional TIP60 complex.

Authors:  Sudhakar Jha; Ashish Gupta; Ashraf Dar; Anindya Dutta
Journal:  Mol Cell Biol       Date:  2013-01-07       Impact factor: 4.272

4.  Reptin and Pontin oligomerization and activity are modulated through histone H3 N-terminal tail interaction.

Authors:  Richard Queval; Christophe Papin; Mathieu Dalvai; Kerstin Bystricky; Odile Humbert
Journal:  J Biol Chem       Date:  2014-10-21       Impact factor: 5.157

Review 5.  Plasmodium falciparum R2TP complex: driver of parasite Hsp90 function.

Authors:  Thiago V Seraphim; Graham Chakafana; Addmore Shonhai; Walid A Houry
Journal:  Biophys Rev       Date:  2019-11-16

6.  Alternative oligomeric states of the yeast Rvb1/Rvb2 complex induced by histidine tags.

Authors:  Kevin L Y Cheung; Jennifer Huen; Yoshito Kakihara; Walid A Houry; Joaquin Ortega
Journal:  J Mol Biol       Date:  2010-10-08       Impact factor: 5.469

7.  Structure of Yin Yang 1 oligomers that cooperate with RuvBL1-RuvBL2 ATPases.

Authors:  Andrés López-Perrote; Hanan E Alatwi; Eva Torreira; Amani Ismail; Silvia Ayora; Jessica A Downs; Oscar Llorca
Journal:  J Biol Chem       Date:  2014-07-02       Impact factor: 5.157

8.  Axonemal dynein assembly requires the R2TP complex component Pontin.

Authors:  Yuanyuan Li; Lu Zhao; Shiaulou Yuan; Jiefang Zhang; Zhaoxia Sun
Journal:  Development       Date:  2017-11-07       Impact factor: 6.868

9.  Adenosine triphosphatase pontin is overexpressed in hepatocellular carcinoma and coregulated with reptin through a new posttranslational mechanism.

Authors:  Valérie Haurie; Ludovic Ménard; Alexandra Nicou; Christian Touriol; Philippe Metzler; Jérémy Fernandez; Danièle Taras; Patrick Lestienne; Charles Balabaud; Paulette Bioulac-Sage; Hervé Prats; Jessica Zucman-Rossi; Jean Rosenbaum
Journal:  Hepatology       Date:  2009-12       Impact factor: 17.425

10.  SWR-C and INO80 chromatin remodelers recognize nucleosome-free regions near +1 nucleosomes.

Authors:  Kuangyu Yen; Vinesh Vinayachandran; B Franklin Pugh
Journal:  Cell       Date:  2013-09-12       Impact factor: 41.582

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