Literature DB >> 18937503

Structural and functional characterization of the c-terminal domain of the ecdysteroid phosphate phosphatase from bombyx mori reveals a new enzymatic activity.

Yunting Chen1, Jean Jakoncic, Jin Wang, Xiliang Zheng, Nick Carpino, Nicolas Nassar.   

Abstract

Here, we present the crystal structure of the ecdysone phosphate phosphatase (EPPase) phosphoglycerate mutase (PGM) homology domain, the first structure of a steroid phosphate phosphatase. The structure reveals an alpha/beta-fold common to members of the two histidine (2H)-phosphatase superfamily with strong homology to the Suppressor of T-cell receptor signaling-1 (Sts-1 PGM) protein. The putative EPPase PGM active site contains signature residues shared by 2H-phosphatase enzymes, including a conserved histidine (His80) that acts as a nucleophile during catalysis. The physiological substrate ecdysone 22-phosphate was modeled in a hydrophobic cavity close to the phosphate-binding site. EPPase PGM shows limited substrate specificity with an ability to hydrolyze steroid phosphates, the phospho-tyrosine (pTyr) substrate analogue para-nitrophenylphosphate ( pNPP) and pTyr-containing peptides and proteins. Altogether, our data demonstrate a new protein tyrosine phosphatase (PTP) activity for EPPase. They suggest that EPPase and its closest homologues can be grouped into a distinct subfamily in the large 2H-phosphatase superfamily of proteins.

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Year:  2008        PMID: 18937503      PMCID: PMC2722925          DOI: 10.1021/bi801318w

Source DB:  PubMed          Journal:  Biochemistry        ISSN: 0006-2960            Impact factor:   3.162


  37 in total

Review 1.  Structure, function, and evolution of phosphoglycerate mutases: comparison with fructose-2,6-bisphosphatase, acid phosphatase, and alkaline phosphatase.

Authors:  M J Jedrzejas
Journal:  Prog Biophys Mol Biol       Date:  2000       Impact factor: 3.667

2.  Fast, efficient generation of high-quality atomic charges. AM1-BCC model: II. Parameterization and validation.

Authors:  Araz Jakalian; David B Jack; Christopher I Bayly
Journal:  J Comput Chem       Date:  2002-12       Impact factor: 3.376

Review 3.  Steroid signaling in plants and insects--common themes, different pathways.

Authors:  Carl S Thummel; Joanne Chory
Journal:  Genes Dev       Date:  2002-12-15       Impact factor: 11.361

4.  Inhibition of prostatic acid phosphatase by alpha-hydroxycarboxylic acids.

Authors:  G S KILSHEIMER; B AXELROD
Journal:  J Biol Chem       Date:  1957-08       Impact factor: 5.157

5.  Assessment of phase accuracy by cross validation: the free R value. Methods and applications.

Authors:  A T Brünger
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  1993-01-01

6.  wARP: improvement and extension of crystallographic phases by weighted averaging of multiple-refined dummy atomic models.

Authors:  A Perrakis; T K Sixma; K S Wilson; V S Lamzin
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  1997-07-01

7.  Crystal structure of human prostatic acid phosphatase .

Authors:  C G Jakob; K Lewinski; R Kuciel; W Ostrowski; L Lebioda
Journal:  Prostate       Date:  2000-02-15       Impact factor: 4.104

8.  Antagonistic actions of ecdysone and insulins determine final size in Drosophila.

Authors:  Julien Colombani; Laurence Bianchini; Sophie Layalle; Emilie Pondeville; Chantal Dauphin-Villemant; Christophe Antoniewski; Clément Carré; Stéphane Noselli; Pierre Léopold
Journal:  Science       Date:  2005-09-22       Impact factor: 47.728

Review 9.  Mechanisms of steroid-triggered programmed cell death in Drosophila.

Authors:  Viravuth P Yin; Carl S Thummel
Journal:  Semin Cell Dev Biol       Date:  2005-01-18       Impact factor: 7.727

10.  Improved procedures for the determination of lipid phosphorus by malachite green.

Authors:  X Zhou; G Arthur
Journal:  J Lipid Res       Date:  1992-08       Impact factor: 5.922

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  6 in total

1.  Structural and Functional Characterization of the Histidine Phosphatase Domains of Human Sts-1 and Sts-2.

Authors:  Weijie Zhou; Yue Yin; Alexandra S Weinheimer; Neena Kaur; Nick Carpino; Jarrod B French
Journal:  Biochemistry       Date:  2017-08-21       Impact factor: 3.162

2.  The 1.35 A resolution structure of the phosphatase domain of the suppressor of T-cell receptor signaling protein in complex with sulfate.

Authors:  Jean Jakoncic; Benjamin Sondgeroth; Nick Carpino; Nicolas Nassar
Journal:  Acta Crystallogr Sect F Struct Biol Cryst Commun       Date:  2010-05-25

3.  Tungstate as a Transition State Analog for Catalysis by Alkaline Phosphatase.

Authors:  Ariana Peck; Fanny Sunden; Logan D Andrews; Vijay S Pande; Daniel Herschlag
Journal:  J Mol Biol       Date:  2016-05-14       Impact factor: 5.469

Review 4.  TULA-family proteins: an odd couple.

Authors:  Alexander Y Tsygankov
Journal:  Cell Mol Life Sci       Date:  2009-07-08       Impact factor: 9.261

5.  Structural and functional characterization of the 2H-phosphatase domain of Sts-2 reveals an acid-dependent phosphatase activity.

Authors:  Yunting Chen; Jean Jakoncic; Nick Carpino; Nicolas Nassar
Journal:  Biochemistry       Date:  2009-03-03       Impact factor: 3.162

6.  Ensembles generated from crystal structures of single distant homologues solve challenging molecular-replacement cases in AMPLE.

Authors:  Daniel J Rigden; Jens M H Thomas; Felix Simkovic; Adam Simpkin; Martyn D Winn; Olga Mayans; Ronan M Keegan
Journal:  Acta Crystallogr D Struct Biol       Date:  2018-03-02       Impact factor: 7.652

  6 in total

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