Literature DB >> 18936169

Cellular concentrations of DDB2 regulate dynamic binding of DDB1 at UV-induced DNA damage.

Sergey Alekseev1, Martijn S Luijsterburg, Alex Pines, Bart Geverts, Pierre-Olivier Mari, Giuseppina Giglia-Mari, Hannes Lans, Adriaan B Houtsmuller, Leon H F Mullenders, Jan H J Hoeijmakers, Wim Vermeulen.   

Abstract

Nucleotide excision repair (NER) is the principal pathway for counteracting cytotoxic and mutagenic effects of UV irradiation. To provide insight into the in vivo regulation of the DNA damage recognition step of global genome NER (GG-NER), we constructed cell lines expressing fluorescently tagged damaged DNA binding protein 1 (DDB1). DDB1 is a core subunit of a number of cullin 4-RING ubiquitin ligase complexes. UV-activated DDB1-DDB2-CUL4A-ROC1 ubiquitin ligase participates in the initiation of GG-NER and triggers the UV-dependent degradation of its subunit DDB2. We found that DDB1 rapidly accumulates on DNA damage sites. However, its binding to damaged DNA is not static, since DDB1 constantly dissociates from and binds to DNA lesions. DDB2, but not CUL4A, was indispensable for binding of DDB1 to DNA damage sites. The residence time of DDB1 on the damage site is independent of the main damage-recognizing protein of GG-NER, XPC, as well as of UV-induced proteolysis of DDB2. The amount of DDB1 that is temporally immobilized on damaged DNA critically depends on DDB2 levels in the cell. We propose a model in which UV-dependent degradation of DDB2 is important for the release of DDB1 from continuous association to unrepaired DNA and makes DDB1 available for its other DNA damage response functions.

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Year:  2008        PMID: 18936169      PMCID: PMC2593426          DOI: 10.1128/MCB.01108-08

Source DB:  PubMed          Journal:  Mol Cell Biol        ISSN: 0270-7306            Impact factor:   4.272


  69 in total

1.  Histone H3 and H4 ubiquitylation by the CUL4-DDB-ROC1 ubiquitin ligase facilitates cellular response to DNA damage.

Authors:  Hengbin Wang; Ling Zhai; Jun Xu; Heui-Yun Joo; Sarah Jackson; Hediye Erdjument-Bromage; Paul Tempst; Yue Xiong; Yi Zhang
Journal:  Mol Cell       Date:  2006-05-05       Impact factor: 17.970

2.  CSA-dependent degradation of CSB by the ubiquitin-proteasome pathway establishes a link between complementation factors of the Cockayne syndrome.

Authors:  Regina Groisman; Isao Kuraoka; Odile Chevallier; Nogaye Gaye; Thierry Magnaldo; Kiyoji Tanaka; Alexei F Kisselev; Annick Harel-Bellan; Yoshihiro Nakatani
Journal:  Genes Dev       Date:  2006-06-01       Impact factor: 11.361

Review 3.  Molecular mechanisms of mammalian global genome nucleotide excision repair.

Authors:  Ludovic C J Gillet; Orlando D Schärer
Journal:  Chem Rev       Date:  2006-02       Impact factor: 60.622

4.  Versatile DNA damage detection by the global genome nucleotide excision repair protein XPC.

Authors:  Deborah Hoogstraten; Steven Bergink; Jessica M Y Ng; Vincent H M Verbiest; Martijn S Luijsterburg; Bart Geverts; Anja Raams; Christoffel Dinant; Jan H J Hoeijmakers; Wim Vermeulen; Adriaan B Houtsmuller
Journal:  J Cell Sci       Date:  2008-08-05       Impact factor: 5.285

5.  Characterization of DNA recognition by the human UV-damaged DNA-binding protein.

Authors:  Y Fujiwara; C Masutani; T Mizukoshi; J Kondo; F Hanaoka; S Iwai
Journal:  J Biol Chem       Date:  1999-07-09       Impact factor: 5.157

6.  UV-induced ubiquitylation of XPC protein mediated by UV-DDB-ubiquitin ligase complex.

Authors:  Kaoru Sugasawa; Yuki Okuda; Masafumi Saijo; Ryotaro Nishi; Noriyuki Matsuda; Gilbert Chu; Toshio Mori; Shigenori Iwai; Keiji Tanaka; Kiyoji Tanaka; Fumio Hanaoka
Journal:  Cell       Date:  2005-05-06       Impact factor: 41.582

7.  The xeroderma pigmentosum group E gene product DDB2 is a specific target of cullin 4A in mammalian cells.

Authors:  A Nag; T Bondar; S Shiv; P Raychaudhuri
Journal:  Mol Cell Biol       Date:  2001-10       Impact factor: 4.272

8.  Deletion of DDB1 in mouse brain and lens leads to p53-dependent elimination of proliferating cells.

Authors:  Yong Cang; Jianxuan Zhang; Sally A Nicholas; Jayson Bastien; Baojie Li; Pengbo Zhou; Stephen P Goff
Journal:  Cell       Date:  2006-12-01       Impact factor: 41.582

9.  Phase resetting of the mammalian circadian clock by DNA damage.

Authors:  Małgorzata Oklejewicz; Eugin Destici; Filippo Tamanini; Roelof A Hut; Roel Janssens; Gijsbertus T J van der Horst
Journal:  Curr Biol       Date:  2008-02-26       Impact factor: 10.834

Review 10.  Transcription-coupled nucleotide excision repair in mammalian cells: molecular mechanisms and biological effects.

Authors:  Maria Fousteri; Leon H F Mullenders
Journal:  Cell Res       Date:  2008-01       Impact factor: 25.617

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  19 in total

Review 1.  DNA damage response.

Authors:  Giuseppina Giglia-Mari; Angelika Zotter; Wim Vermeulen
Journal:  Cold Spring Harb Perspect Biol       Date:  2011-01-01       Impact factor: 10.005

2.  Strand- and site-specific DNA lesion demarcation by the xeroderma pigmentosum group D helicase.

Authors:  Nadine Mathieu; Nina Kaczmarek; Hanspeter Naegeli
Journal:  Proc Natl Acad Sci U S A       Date:  2010-09-27       Impact factor: 11.205

3.  DDB2 association with PCNA is required for its degradation after UV-induced DNA damage.

Authors:  Ornella Cazzalini; Paola Perucca; Roberto Mocchi; Sabrina Sommatis; Ennio Prosperi; Lucia Anna Stivala
Journal:  Cell Cycle       Date:  2013-11-04       Impact factor: 4.534

4.  Single-molecule analysis reveals human UV-damaged DNA-binding protein (UV-DDB) dimerizes on DNA via multiple kinetic intermediates.

Authors:  Harshad Ghodke; Hong Wang; Ching L Hsieh; Selamawit Woldemeskel; Simon C Watkins; Vesna Rapić-Otrin; Bennett Van Houten
Journal:  Proc Natl Acad Sci U S A       Date:  2014-04-23       Impact factor: 11.205

Review 5.  Orchestral maneuvers at the damaged sites in nucleotide excision repair.

Authors:  Sergey Alekseev; Frédéric Coin
Journal:  Cell Mol Life Sci       Date:  2015-02-15       Impact factor: 9.261

6.  [Bioinformatics analysis of expression and function of EXD3 gene in gastric cancer].

Authors:  Dengzhong Sun; Mulin Liu; Fuxin Huang; Fuxin Huang
Journal:  Nan Fang Yi Ke Da Xue Xue Bao       Date:  2019-02-28

7.  Damaged DNA induced UV-damaged DNA-binding protein (UV-DDB) dimerization and its roles in chromatinized DNA repair.

Authors:  Joanne I Yeh; Arthur S Levine; Shoucheng Du; Unmesh Chinte; Harshad Ghodke; Hong Wang; Haibin Shi; Ching L Hsieh; James F Conway; Bennett Van Houten; Vesna Rapić-Otrin
Journal:  Proc Natl Acad Sci U S A       Date:  2012-07-20       Impact factor: 11.205

Review 8.  Expanding molecular roles of UV-DDB: Shining light on genome stability and cancer.

Authors:  Maria Beecher; Namrata Kumar; Sunbok Jang; Vesna Rapić-Otrin; Bennett Van Houten
Journal:  DNA Repair (Amst)       Date:  2020-04-27

9.  Damaged DNA-binding protein down-regulates epigenetic mark H3K56Ac through histone deacetylase 1 and 2.

Authors:  Qianzheng Zhu; Aruna Battu; Alo Ray; Gulzar Wani; Jiang Qian; Jinshan He; Qi-en Wang; Altaf A Wani
Journal:  Mutat Res       Date:  2015-01-24       Impact factor: 2.433

10.  DDB2 promotes chromatin decondensation at UV-induced DNA damage.

Authors:  Martijn S Luijsterburg; Michael Lindh; Klara Acs; Mischa G Vrouwe; Alex Pines; Haico van Attikum; Leon H Mullenders; Nico P Dantuma
Journal:  J Cell Biol       Date:  2012-04-09       Impact factor: 10.539

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