Literature DB >> 18932019

A biology-based approach for quantitative structure-activity relationships (QSARs) in ecotoxicity.

Tjalling Jager1, Sebastiaan A L M Kooijman.   

Abstract

Quantitative structure-activity relationships (QSARs) for ecotoxicity can be used to fill data gaps and limit toxicity testing on animals. QSAR development may additionally reveal mechanistic information based on observed patterns in the data. However, the use of descriptive summary statistics for toxicity, such as the 4-day LC50 for fish, introduces bias and ignores valuable kinetic information in the data. Biology-based methods use all of the toxicity data in time to derive time-independent and unbiased parameter estimates. Such an approach offers whole new opportunities for mechanism-based QSAR development. In this paper, we apply the hazard model from DEBtox to analyse survival data for fathead minnows (Pimephales promelas). Different modes of action resulted in different patterns in the parameter estimates, and therefore, the toxicity data by themselves reveal insight into the actual mechanism of toxic action.

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Year:  2008        PMID: 18932019     DOI: 10.1007/s10646-008-0271-4

Source DB:  PubMed          Journal:  Ecotoxicology        ISSN: 0963-9292            Impact factor:   2.823


  15 in total

1.  The relationship between elimination rates and partition coefficients.

Authors:  S A L M Kooijman; T Jager; B W Kooi
Journal:  Chemosphere       Date:  2004-11       Impact factor: 7.086

2.  Meeting the scientific needs of ecological risk assessment in a regulatory context.

Authors:  Steven P Bradbury; Tom C J Feijtel; Cornelis J Van Leeuwen
Journal:  Environ Sci Technol       Date:  2004-12-01       Impact factor: 9.028

3.  Making sense of ecotoxicological test results: towards application of process-based models.

Authors:  Tjalling Jager; Evelyn H W Heugens; Sebastiaan A L M Kooijman
Journal:  Ecotoxicology       Date:  2006-04-20       Impact factor: 2.823

4.  Scaling relationships based on partition coefficients and body sizes have similarities and interactions.

Authors:  S A L M Kooijman; J Baas; D Bontje; M Broerse; T Jager; C A M Van Gestel; B Van Hattum
Journal:  SAR QSAR Environ Res       Date:  2007 May-Jun       Impact factor: 3.000

5.  Novel view on predicting acute toxicity: decomposing toxicity data in species vulnerability and chemical potency.

Authors:  Tjalling Jager; Leo Posthuma; Dick de Zwart; Dik van de Meent
Journal:  Ecotoxicol Environ Saf       Date:  2007-05-09       Impact factor: 6.291

6.  Size-dependent bioconcentration kinetics of hydrophobic organic chemicals in fish based on diffusive mass transfer and allometric relationships.

Authors:  D T Sijm; A van der Linde
Journal:  Environ Sci Technol       Date:  1995-11       Impact factor: 9.028

7.  No-effect concentration as a basis for ecological risk assessment.

Authors:  S A Kooijman; J J Bedaux; W Slob
Journal:  Risk Anal       Date:  1996-08       Impact factor: 4.000

8.  Temporal dynamics of effect concentrations.

Authors:  Olga Alda Alvarez; Tjalling Jager; Beatriz Nuñez Colao; Jan E Kammenga
Journal:  Environ Sci Technol       Date:  2006-04-01       Impact factor: 9.028

Review 9.  Quantitative structure-activity relationships and ecological risk assessment: an overview of predictive aquatic toxicology research.

Authors:  S P Bradbury
Journal:  Toxicol Lett       Date:  1995-09       Impact factor: 4.372

Review 10.  Electrophiles and acute toxicity to fish.

Authors:  J L Hermens
Journal:  Environ Health Perspect       Date:  1990-07       Impact factor: 9.031

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  7 in total

1.  Reconsidering sufficient and optimal test design in acute toxicity testing.

Authors:  Tjalling Jager
Journal:  Ecotoxicology       Date:  2013-11-07       Impact factor: 2.823

2.  Sensitivity of animals to chemical compounds links to metabolic rate.

Authors:  Jan Baas; Sebastiaan A L M Kooijman
Journal:  Ecotoxicology       Date:  2015-01-07       Impact factor: 2.823

3.  A biology-based approach for mixture toxicity of multiple endpoints over the life cycle.

Authors:  Tjalling Jager; Tine Vandenbrouck; Jan Baas; Wim M De Coen; Sebastiaan A L M Kooijman
Journal:  Ecotoxicology       Date:  2009-09-22       Impact factor: 2.823

4.  Significance of xenobiotic metabolism for bioaccumulation kinetics of organic chemicals in Gammarus pulex.

Authors:  Roman Ashauer; Anita Hintermeister; Isabel O'Connor; Maline Elumelu; Juliane Hollender; Beate I Escher
Journal:  Environ Sci Technol       Date:  2012-02-28       Impact factor: 9.028

5.  Reduced life expectancy model for effects of long term exposure on lethal toxicity with fish.

Authors:  Vibha Verma; Qiming J Yu; Des W Connell
Journal:  ISRN Toxicol       Date:  2013-12-26

6.  Measured and modeled toxicokinetics in cultured fish cells and application to in vitro-in vivo toxicity extrapolation.

Authors:  Julita Stadnicka-Michalak; Katrin Tanneberger; Kristin Schirmer; Roman Ashauer
Journal:  PLoS One       Date:  2014-03-19       Impact factor: 3.240

7.  Modelling survival: exposure pattern, species sensitivity and uncertainty.

Authors:  Roman Ashauer; Carlo Albert; Starrlight Augustine; Nina Cedergreen; Sandrine Charles; Virginie Ducrot; Andreas Focks; Faten Gabsi; André Gergs; Benoit Goussen; Tjalling Jager; Nynke I Kramer; Anna-Maija Nyman; Veronique Poulsen; Stefan Reichenberger; Ralf B Schäfer; Paul J Van den Brink; Karin Veltman; Sören Vogel; Elke I Zimmer; Thomas G Preuss
Journal:  Sci Rep       Date:  2016-07-06       Impact factor: 4.379

  7 in total

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