Literature DB >> 18929004

Quantitative structure-retention relationships of pesticides in reversed-phase high-performance liquid chromatography based on WHIM and GETAWAY molecular descriptors.

Angelo Antonio D'Archivio1, Maria Anna Maggi, Pietro Mazzeo, Fabrizio Ruggieri.   

Abstract

The ability of the Weighted Holistic Invariant Molecular (WHIM) and GEometry, Topology, and Atom-Weights AssemblY (GETAWAY) descriptors to represent the effect of molecular structure on the retention of pesticides in reversed-phase high-performance liquid chromatography (RP-HPLC) is investigated. To this end, two retention data sets previously collected in water-acetonitrile mobile phase are re-examined. The first data set (data-set-1) consists of retention data of 26 neutral compounds belonging to widely used pesticide classes, collected within the mobile phase composition range 40-65% (v/v) acetonitrile. The second data set (data-set-2) describes retention of phenoxy acid herbicides and structurally related compounds (benzoic acid and phenylacetic acid derivatives), as a whole covering the pK(a) range 2.3-4.3, as a function of mobile phase composition, ranging between 30 and 70% (v/v) acetonitrile, and pH, ranging between 2 and 5. For each data set, the mobile phase attributes are combined with WHIM or GETAWAY descriptors into "mixed" predictive models in order to attempt retention modelling within the whole mobile phase composition range of analytical interest. Six- or seven-dimensional multilinear models, preliminarily selected using a genetic algorithm, were improved using a multi-layer artificial neural network (ANN) learned by back propagation. ANN performance was tested on three molecules not used in the learning stage and by leave-more-out cross validation. The results reveal that while WHIM descriptors seem not adequate to model retention of solutes of data-set-1, GETAWAY descriptors provide a satisfactory retention model. On the other hand WHIM and GETAWAY descriptors applied to data-set-2 provide a similar performance, even if slightly worse as compared with the above case. Accuracy of retention modelling in these cases is comparable or slightly poorer as compared with the results previously obtained by combining quantum chemical descriptors or usual physico-chemical solute properties (log k(ow) and pK(a)) and mobile phase attributes.

Entities:  

Year:  2008        PMID: 18929004     DOI: 10.1016/j.aca.2008.09.018

Source DB:  PubMed          Journal:  Anal Chim Acta        ISSN: 0003-2670            Impact factor:   6.558


  4 in total

1.  A QSAR Study Based on SVM for the Compound of Hydroxyl Benzoic Esters.

Authors:  Li Wen; Qing Li; Wei Li; Qiao Cai; Yong-Ming Cai
Journal:  Bioinorg Chem Appl       Date:  2017-07-03       Impact factor: 7.778

2.  Retention Modelling of Phenoxy Acid Herbicides in Reversed-Phase HPLC under Gradient Elution.

Authors:  Alessandra Biancolillo; Maria Anna Maggi; Sebastian Bassi; Federico Marini; Angelo Antonio D'Archivio
Journal:  Molecules       Date:  2020-03-11       Impact factor: 4.411

3.  HATS5m as an Example of GETAWAY Molecular Descriptor in Assessing the Similarity/Diversity of the Structural Features of 4-Thiazolidinone.

Authors:  Mariusz Zapadka; Przemysław Dekowski; Bogumiła Kupcewicz
Journal:  Int J Mol Sci       Date:  2022-06-12       Impact factor: 6.208

4.  UHPLC Analysis of Saffron (Crocus sativus L.): Optimization of Separation Using Chemometrics and Detection of Minor Crocetin Esters.

Authors:  Angelo Antonio D'Archivio; Francesca Di Donato; Martina Foschi; Maria Anna Maggi; Fabrizio Ruggieri
Journal:  Molecules       Date:  2018-07-25       Impact factor: 4.411

  4 in total

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