Literature DB >> 18854836

Cell cycle times of short-term cultures of brain cancers as predictors of survival.

C E Furneaux1, E S Marshall, K Yeoh, S J Monteith, P J Mews, C A Sansur, R J Oskouian, K J Sharples, B C Baguley.   

Abstract

Tumour cytokinetics estimated in vivo as potential doubling times (T(pot) values) have been found to range in a variety of human cancers from 2 days to several weeks and are often related to clinical outcome. We have previously developed a method to estimate culture cycle times of short-term cultures of surgical material for several tumour types and found, surprisingly, that their range was similar to that reported for T(pot) values. As T(pot) is recognised as important prognostic variable in cancer, we wished to determine whether culture cycle times had clinical significance. Brain tumour material obtained at surgery from 70 patients with glioblastoma, medulloblastoma, astrocytoma, oligodendroglioma and metastatic melanoma was cultured for 7 days on 96-well plates, coated with agarose to prevent proliferation of fibroblasts. Culture cycle times were estimated from relative (3)H-thymidine incorporation in the presence and absence of cell division. Patients were divided into two groups on the basis of culture cycle times of < or =10 days and >10 days and patient survival was compared. For patients with brain cancers of all types, median survival for the < or =10-day and >10-day groups were 5.1 and 12.5 months, respectively (P=0.0009). For 42 patients with glioblastoma, the corresponding values were 6.5 and 9.0 months, respectively (P=0.03). Lower grade gliomas had longer median culture cycle times (16 days) than those of medulloblastomas (9.9 days), glioblastomas (9.8 days) or melanomas (6.7 days). We conclude that culture cycle times determined using short-term cultures of surgical material from brain tumours correlate with patient survival. Tumour cells thus appear to preserve important cytokinetic characteristics when transferred to culture.

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Year:  2008        PMID: 18854836      PMCID: PMC2584938          DOI: 10.1038/sj.bjc.6604716

Source DB:  PubMed          Journal:  Br J Cancer        ISSN: 0007-0920            Impact factor:   7.640


In vivo tumour proliferation rates, initially estimated from the percentages of either mitotic cells or S-phase cells, have long been known to be related at least for some tumour types to clinical outcome (Tannock, 1978). Other estimates of proliferative activity, including staining with antibodies to antigens such as Ki-67 and PCNA, and more recently, gene expression profiles (Nutt ), have also been associated with clinical outcome in some studies. Potential tumour doubling times (Tpot values) rely on simultaneous measurement of S-phase percentage and S-phase duration and provide more quantitative estimates, which for many tumour types cover a range from 2 days to several weeks (Wilson ; Rew and Wilson, 2000). However, although short Tpot values are generally related to poor prognosis, the value of Tpot as an independent prognostic indicator is controversial (Haustermans and Fowler, 2001), and in the case of brain cancers, Tpot values are not clearly related to survival (Danova ; Struikmans ). We have previously investigated the possibility that data from short-term cultures of clinical tumour material might have prognostic significance (Marshall , 2003; Baguley ), and we were particularly interested in the possibility of using tumour material to estimate culture cycle time. Direct measurement in such cultures is impossible because of the presence of host cells in the sample and the loss of tumour cells, through apoptosis or other pathways, during primary culture. However, we had previously found using a series of human tumour cell lines that the degree of incorporation of 3H-thymidine into DNA at different times after addition of paclitaxel, an inhibitor of mitosis and cell division, was a function of the measured culture doubling time (Baguley ). We assumed that culture-doubling time was similar to culture cycle time for cell lines (i.e., that cell loss was negligible) and developed an empirical formula that related culture cycle time to the 3H-thymidine data. We then considered whether the above formula, obtained using cell lines, might be applied to short-term (7-day) cultures of tumour samples obtained at surgery. The nature of the assay (comparison of 3H-thymidine incorporation with and without paclitaxel) minimised the consequences of tumour cell loss during culture because any cell loss would affect cultures with and without paclitaxel almost equally. Surprisingly, culture cycle times estimated in this manner were found to vary among individual samples from approximately 2 days to more than 40 days, a range that was remarkably similar to that obtained in Tpot measurements (Baguley and Marshall, 2004). Furthermore, in a small study of 16 patients with ovarian cancer, derived culture cycle times were found to be related to patient survival (Baguley and Marshall, 2004). Here, we have addressed the question of whether the same approach might be applied to patients with brain tumours. We cultured samples from a range of brain tumours and have also included melanomas metastatic to the brain, as they are also tumours derived from the neural crest. We then determined whether culture cycle times derived by this approach were related to overall survival.

Materials and methods

Culture of tumour samples

Patients received surgery in the Department of Neurosurgery, Auckland City Hospital. All studies were carried under guidelines approved by the Northern X Regional Ethics Committee, and informed consent was obtained from all patients. A portion of tumour tissue taken from patients undergoing surgery for brain malignancies was placed in α-MEM growth medium containing insulin (10 μg/ml), transferrin (10 μg/ml), selenite (10 ng/ml) and 5% fetal bovine serum and was used either immediately or after overnight storage at 4°C. Tumour material was disaggregated to form small cellular clusters to preserve, as far as possible, cell–cell and cell–matrix interactions (Baguley ). Preparations were monitored by phase contrast microscopy and by examination of haematoxylin/eosin-stained cytospins. Cell suspensions, containing both single cells and cell clusters, were transferred to 96-well tissue culture plates that had previously been coated with a thin layer of agarose to prevent the growth of fibroblasts and were grown at 37°C under an atmosphere of 5% O2, 5% CO2 and 90% N2 (Marshall ).

Determination of culture cycle times

Plates were set up to contain between 940 and 7500 cells in a volume of 150 μl, to allow selection of a cell density where 3H-thymidine incorporation after 7 days was proportional to the initial number of cells added. Cultures were grown either in the absence of drug or in the presence of paclitaxel at five 3-fold concentration steps up to a maximum of 2 μM. S-phase cells remaining at the end of the incubation were labelled by the addition of 3H-thymidine over the last 24 h (Baguley ). Cultures were harvested and duplicate samples were analysed for each paclitaxel dose with multiple control samples. 3H-thymidine incorporation data in the presence of paclitaxel were fitted by a least-squares fit to an exponential of the form y=P+ae−, where y is the radioactivity (corrected for background), x is the paclitaxel concentration and a and b are variables, as shown in the two examples in Figure 1. Values of P therefore reflected the proportion of remaining S-phase cells at the end of the incubation period, which in turn reflected the proportion of G1-phase cells that were feeding into S-phase. The estimated culture cycle time in days (T) was calculated using an equation T=−3.78/(log10 P), which was derived from empirical data obtained with cell lines (Baguley ). When P was >0.81 (T>40), culture cycle time was not accurately provided by this formula and was arbitrarily set at 40 days.
Figure 1

Examples of 3H-thymidine incorporation as a function of paclitaxel concentration. Profiles are shown for patients D4 (A), S4 (B) and B6 (C), with designations in Table 1.

Statistics

Median culture cycle times were compared using the Kruskall–Wallis test, and proportions using a χ2 test. Survival was compared using Kaplan–Meier survival curves with log rank tests and Cox regression. Analysis was carried out using Stata version 9.

Results

Incorporation of 3H-thymidine by primary cultures in the presence of paclitaxel were found to decrease with increasing drug concentration to a ‘plateau’ value (Figure 1) from which the culture cycle time was calculated. Culture cycle times estimated using this method ranged from 2 to ⩾40 days, with a median of 10 days (Table 1). Survival times for the patients from whom tumour samples were taken, together with data for age, gender, tumour grade and treatment, are also shown in Table 1.
Table 1

Clinical and biological data

Patient Age (years) Gender Tumour type Plateau (%) a Culture cycle time (days) Survival (days) b Radiotherapy
A186MGlioblastoma389.0105Yes
A274MMetastatic melanoma7530.3559Yes
B154FGlioblastoma419.8271No
B214FGlioblastoma195.2282Yes
B368FGlioblastoma399.2222Yes
B467FGlioblastoma4210267No
B557MAstrocytoma, anaplastic286.8101 
B652MGlioblastoma8940.0489*Yes
C173MGlioblastoma7835.0399Yes
D132MMedulloblastoma5514.6343*Yes
D254MGlioblastoma5514.6368Yes
D37FAstrocytoma, pilocytic5514.6289No
D469MGlioblastoma4611.2104Yes
E136MAstrocytoma, anaplastic6620.93168Yes
E249MOligodendroglioma, anaplastic7631.7868*Yes
F12MGlioblastoma378.878No
F272MGlioblastoma266.5197Yes
F374FGlioblastoma389.0491 
F368MMetastatic melanoma7936.9378No
G143MAstrocytoma, anaplastic6419.5316*Yes
G213MGlioblastoma5916.5476Yes
G335MGlioblastoma, recurrent337.9462 
G245MGlioblastoma409.5933Yes
H164MGlioblastoma6822.6230Yes
H280FGlioblastoma8540.071No
H373FGlioblastoma368.538No
H474MAstrocytoma, anaplastic7835.022 
H538FMedulloblastoma9240.0146No
H640FOligodendroglioma337.9166* 
H571MGlioblastoma5213.3275Yes
J144MMetastatic melanoma327.62No
J232MAstrocytoma8040.02023Yes
J358FGlioblastoma5012.6380No
J410FMedulloblastoma164.72195* 
K176FGlioblastoma5615.021No
K249MMetastatic melanoma389.0251Yes
K347FGlioblastoma337.9156No
K466MGlioblastoma276.6101No
L157MGlioblastoma276.6218No
L269FGlioblastoma164.746No
M149MGlioblastoma7.33.3111Yes
M243MMetastatic melanoma8.73.691* 
M336FMedulloblastoma6.93.3936*Yes
M457MMetastatic melanoma113.918No
M575MAstrocytoma, anaplastic6620.9331Yes
M628MAstrocytoma, anaplastic5414.1219*No
N110FMedulloblastoma6318.8455*Yes
N242MAstrocytoma, anaplastic4912.21301Yes
N350MGlioblastoma10040.0326Yes
O157FGlioblastoma4912.2416Yes
P177FGlioblastoma4210.080No
P255MGlioblastoma4811.9239Yes
P363MGlioblastoma409.565No
R165FMetastatic melanoma225.7112Yes
R289FGlioblastoma235.971No
R373MGlioblastoma174.971No
R432FGlioblastoma6419.5986Yes
S131FOligodendroglioma, anaplastic5514.62354Yes
S265FGlioblastoma419.8260Yes
S340MMetastatic melanoma1.22.028No
S453MGlioblastoma3.32.6276Yes
S563FGlioblastoma378.8293 
T153MOligoastrocytoma5816.06464*No
T248FGlioblastoma5615.0144Yes
U140FGlioblastoma7530.3694*Yes
V166FGlioblastoma4210.0549Yes
V232FGlioblastoma256.3230Yes
W210MMedulloblastoma113.969Yes
W363MGlioblastoma7125.4230 
Y169MGlioblastoma8640.047No

Results from 3H-thymidine incorporation assays, examples of which are shown in Figure 1.

Patients alive at the time of analysis are marked by an asterisk.

Table 2 compares survival and culture cycle times for the different age, gender, tumour type and treatment groups. Survival varied by age (P=0.002) and the estimated median survival times in months were 9.5 for those aged under 30 years, 30.7 for those aged 30–50 years, 9.1 for those aged 50–59 years, 7.3 for those aged 60–69 years and 2.6 for those aged 70 years and above. There was no difference in survival by gender (the median survival times were 8.9 months for females and 8.2 months for males, P=0.9). Survival was also related to tumour type (P=0.0004, Table 2). For patients with glioblastoma, the proportion alive after 1 year was estimated to be 28%, compared with 64% for patients with astrocytoma/oligodendroglioma, 67% for patients with medulloblastoma and 31% for patients with metastatic melanoma. Some of the patients received radiotherapy (median dose 56 Gy), but data were not available for all patients. The median survival times for patients receiving radiotherapy and those not receiving radiotherapy were 12.1 and 2.6 months, respectively (P=0.0004). Only nine patients received chemotherapy, most of whom also received radiotherapy.
Table 2

Associations between survival, culture cycle time and demographic and treatment variables

  No. Median culture cycle time in days (95% CI) Cycle ⩽10 days, n (%) Cycle >10 days, n (%) Percentage alive at 1 year (95% CI) a Median survival (95% CI) in months a
Age (years)
 <30811.4 (4.5–17.2)4 (50%)4 (50%)45% (11–75%)9.5b
 30–492210.9 (7.6–19.5)11 (50%)11 (50%)62% (37–79%)30.7 (5.1–66.5)
 50–591212.0 (6.7–15.8)5 (42%)7 (58%)42% (15–67%)9.1 (3.3–13.7)
 60–69149.9 (8.8–23.0)7 (50%)7 (50%)14% (2–37%)7.3 (2.1–8.8)
 70+1411.7 (8.2–31.0)7 (50%)7 (50%)21% (5–45%)2.6 (1.2–10.9)
  P=0.9P=0.99 P=0.002+ 
       
Gender
 Male4112.2 (8.9–17.5)18 (44%)23 (56%)39% (24–54%)8.2 (3.6–12.4)
 Female299.8 (8.3–13.3)16 (55%)13 (45%)36% (19–54%)8.9 (4.8–13.7)
  P=0.4P=0.4 P=0.9+ 
       
Tumour type
 Glioblastoma439. 8 (9.1–12.6)23 (53%)20 (47%)28% (16–42%)7.6 (4.7–9.1)
 Astrocytoma/oligodendroglioma1316.0 (13.0–27.5)2 (15%)11 (85%)64% (30–85%)66.4 (9.5–104.1)
 Medulloblastoma69.9 (3.3–37.8)3 (50%)3 (50%)67%bc
 Metastatic melanoma86.7 (3.1–32.4)6 (75%)2 (25%)31% (5–64%)3.7 (0.1–12.4)
  P=0.06P=0.04 P=0.0004+ 
       
Radiotherapy
 Yes3713.3 (9.8–18.7)13 (35%)24 (65%51% (34–66%)12.1 (8.5–18.4)
 No249.6 (7.3–14.0)14 (58%)10 (42%)15% (4–33%)2.6 (1.5–7.2)
 Unknown98.1 (4.9–24.2)7 (78%)2 (22%)46% (11–76%)9.6 (0.7–16.1)
  P=0.2P=0.04 P=0.0003+ 

+Log rank.

Calculated using life table methods.

Numbers too small for calculation.

Survival curve did not go below 50%.

There was no evidence of variation in culture cycle times by age or gender (Table 2), but patients with astrocytomas or oligodendrogliomas had longer culture cycle times (the percentage with culture cycle times of ⩽10 days was 15%, as compared with 53% for glioblastomas, 50% for medulloblastomas and 75% for metastatic melanomas, P=0.04). Patients who had received radiotherapy also had longer culture cycle times (the percentage with culture cycle times ⩽10 days was 35%, compared with 58% for those who did not receive radiotherapy and 78% for those where treatment status was unknown, P=0.04). Patients were divided into two groups with culture cycle times of ⩽10 days and >10 days. Kaplan–Meier survival curves are plotted in Figure 2A. The median survival times were 5.1 months (95% CI (2.6–8.2)) and 12.5 months (95% CI (9.0–18.4)) for those with culture cycle times of ⩽10 days and >10 days, respectively (P=0.0009). Those with culture cycle times ⩽10 days had a 2.4-fold increased risk of death compared with those whose culture cycle times were >10 days (95% CI (1.4–4.2), P=0.001). Adjustment for age and tumour type did not explain the differences (Table 3), and adjustment for radiotherapy increased the hazard ratio slightly, giving an estimated 2.9-fold increase in risk among those with shorter culture cycle times (95% CI (1.5, 5.9), P=0.003), although this estimate may be biased due to missing data on radiotherapy.
Figure 2

Kaplan–Meier survival plots of patients whose culture cycle times were ⩽10 days (dashed line) and >10 days (solid line). (A) All patients. (B) Patients with glioblastoma.

Table 3

Association of culture cycle time, clinical variables and survival estimated using Cox regression

  Hazard ratio 95% CI P-value
Model 1: culture cycle time only
Culture cycle time (days)
  >101.0  
  ⩽102.4(1.4–4.2)0.001
    
Model 2: culture cycle time+age
 Culture cycle time (days)
  >101.0  
  ⩽102.5(1.4–4.4)0.001
    
 Age group (years)
  <301.0  
  30–491.0(0.4–2.9)0.97
  50–591.7(0.6–5.4)0.33
  60–693.6(1.2–10.4)0.02
  70+3.4(1.2–9.7)0.02
    
Model 3: culture cycle time+age+tumour type
 Culture cycle time (days)
  >101.0  
  ⩽102.4(1.3–4.4)0.005
    
 Age group (years)
  <301.0  
  30–490.61(0.20–1.9)0.4
  50–590.86(0.26–2.8)0.8
  60–691.5(0.47–4.6)0.5
  70+1.4(0.46–4.6)0.5
    
 Tumour type
  Glioblastoma1.0  
  Medulloblastoma0.15(0.03–0.79)0.03
  Metastatic melanoma1.3(0.54–2.9)0.6
  Astrocytoma/oligodendroglioma0.37(0.13–1.1)0.07
    
Model 4: culture cycle time+age+tumour type+radiotherapy (days)
 Culture cycle time
  >101.0  
  ⩽102.9(1.5–5.9)0.003
    
 Age group (years)
  <301.0  
  30–490.74(0.25–2.2)0.6
  50–590.53(0.16–1.7)0.3
  60–691.4(0.47–4.5)0.5
  70+1.8(0.60–5.6)0.3
    
 Tumour type
  Glioblastoma1.0  
  Medulloblastoma0.21(0.04–1.0)0.05
  Metastatic melanoma0.93(0.38–2.3)0.9
  Astrocytoma/oligodendroglioma0.30(0.09–0.92)0.03
    
 Radiotherapy
  No1.0  
  Yes0.32(0.16–0.63)0.001
  Unknown0.14(0.05–0.43)0.001
For the 43 patients with glioblastoma, survival (Figure 2B) was also shorter in those with culture cycle times ⩽10 days (P=0.04). The median survival times were 6.5 months (95% CI (2.6–8.5)) for those with culture cycle times ⩽10 days and 9.0 (95% CI (4.7–13.7)) for those with culture cycle times >10 days. Those with culture cycle times ⩽10 days had a 2-fold increased risk of death compared with those with culture cycle times >10 days. Survival was also associated with age in this subgroup (P=0.05), but culture cycle time was not related to age. For the other tumour types, numbers were generally too small for meaningful comparisons of survival, but it was noteworthy that lower-grade gliomas had a longer median culture cycle time (16.0 days) and were associated with a longer median survival (66.4 months) than the other tumour types.

Discussion

The results show a significant relationship between survival and culture cycle times derived from short-term cultures of tumour samples taken at surgery from 70 patients with brain cancer. Culture cycle times varied from 2 days to more than 40 days, and the analysis method chosen was to divide patients into two approximately equal groups with culture cycle times of ⩽10 days and >10 days and to compare Kaplan–Meier survival curves fore each (Figure 2). These provided median survival times of 5.1 and 12.5 months, respectively, with a significant survival difference (P=0.0009). The study also demonstrated that culture cycle time was independent of age and tumour type. The results can be compared with those in a previous study of 16 patients with ovarian cancer treated with carboplatin, where long culture cycle times was associated with increased complete remission rate (Marshall ; Baguley and Marshall, 2004). Re-analysis of this data using the methods employed here showed a median survival time for the ⩽10-day group of 2.9 months (95% CI (0.1–11.8)), which was significantly shorter (P=0.0003) than the median survival time for the >10-day group of 25.6 months (95% CI (11.8–100)). We also have evidence for similar relationships in a larger group of ovarian cancer patients and in a group of patients with melanoma (unpublished results). These studies are the first to our knowledge to identify in vitro proliferation rates of primary tumour cell cultures as a potential marker for survival. The method used here to estimate culture cycle time diverges significantly from the Tpot (potential doubling time) method that has been employed extensively in the past as a cytokinetic parameter (Wilson ; Rew and Wilson, 2000) and deserves comment. The stathmokinetic approach employed relies on the principle that if cell cycle progression is blocked in a certain phase, the proportion of cells in that phase will increase, whereas the proportions in other phases decrease, and that the rate of change of these proportions are a function of culture cycle time. In the specific case of a mitotic poison such as paclitaxel, the number of S-phase cells in control cultures will increase exponentially with time, whereas the number of S-phase cells in drug-treated cultures will decrease with time as a consequence of depletion of the pool of G1-phase cells. The concentration of paclitaxel must be high enough to prevent all cell division, accounting for the shape of the dose–response curves in Figure 1. There are two methods of deriving a relationship between ‘plateau’ values (P) for 3H-thymidine incorporation in these dose–response curves and culture cycle time (T). The first, employed here, is to use an empirical formula T=−3.78/(log10 P) established from a series of cell lines and making the assumption, which is reasonable for cell lines, that the culture cycle time is equal to the doubling time. The second is to base the calculation on a theoretical model for the cell cycle, and we have previously developed such a model, on the basis of the assumption that the transition from G1 phase to S phase is controlled by a probability function (Basse ). Such a model fits experimental data for a number of cell lines treated with paclitaxel and analysed using flow cytometry (Basse , 2004b). The theoretical model provides an equation T=−x/(log10 P), where x tends upwards towards 4.8, as the G1-phase proportion increases towards 100%. Thus, the empirical and theoretical estimates are comparable. There are potential sources of error in this approach, as there are in the Tpot approach, but the results suggest that the approach is valid. The results from primary cultures can be compared with the wealth of published data showing a relationship between Tpot values and survival for several tumour types (Wilson ; Rew and Wilson, 2000). Although the culture cycle times and Tpot values are quite different to each other, they both pertain to the cytokinetic properties of tumour cells, and both indicate a surprisingly wide range in culture cycle times. Unfortunately, we have insufficient data linking culture cycle times to more traditional indices of proliferation. Data for Ki-67 staining and mitotic index were available from histology reports of some of the patients, but these were was not correlated with either survival or culture cycle time (results not shown). A larger controlled study would be needed to compare culture cycle times with histological indicators of cell proliferation or with molecular markers, such as cyclin E expression (Keyomarsi ) and gene expression signatures (Nutt ). However, one interpretation of the data presented in this study is that cytokinetic properties of tumour cells may be preserved, at least initially, after tumour material is removed from the patient. The question of why shorter culture cycle times, or shorter Tpot values, are related to poor clinical outcome still remains to be answered. Such times are not related directly to tumour growth because tumour cells are in a state of continuous turnover, with the net tumour volume doubling time usually in the order of months rather than days (Watson, 1991). Shorter culture cycle times thus reflect higher rates of tumour cell turnover in vivo, which in turn might contribute to greater tumour aggressiveness. Rapid turnover of tumour cells may lead to the generation of a more immunosuppressive microenvironment, which could in turn be linked to poor survival (Kim ). In conclusion, the overall survival of patients with brain cancers in response to therapy most likely reflects a composite of response of tumour cells and host responses to tumour, and it is clear from this study that tumour cell cytokinetics may play a major role. Other studies have demonstrated that radiotherapy and chemotherapy also contribute to survival, raising the question of whether short-term cultures could provide information on response to therapy as well as on cytokinetics. Some of the patients in this study were treated with radiotherapy (Table 1), and the median survival time for patients receiving radiotherapy (12.1 months) was longer than that for patients not receiving radiotherapy (2.6 months). Although part of this difference will reflect patient selection, much is likely to reflect the contribution of therapy. For 21 of the patients in this study, the response of 7-day cultures to radiotherapy (up to 9 Gy) was also measured (Marshall ), but no relationship to survival was found (results not shown). Further research will be required to develop accurate methods of assessing the relative contributions of intrinsic tumour cytokinetics and treatment to survival of patients with brain cancer.
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Journal:  Clin Transl Sci       Date:  2021-11-12       Impact factor: 4.689

6.  Rapid Interval Recurrence of Glioblastoma Following Gross Total Resection: A Possible Indication for GammaTileⓇ Brachytherapy.

Authors:  Teresa P Easwaran; David Sterling; Clara Ferreira; Lindsey Sloan; Christopher Wilke; Elizabeth Neil; Rena Shah; Clark C Chen; Kathryn E Dusenbery
Journal:  Cureus       Date:  2021-11-12

Review 7.  Subtle neuropsychiatric symptoms of glioblastoma multiforme misdiagnosed as depression.

Authors:  Raphael Jerome Leo; Jill N Frodey; Matthew L Ruggieri
Journal:  BMJ Case Rep       Date:  2020-03-17
  7 in total

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