Literature DB >> 18850373

Lung tissue storage: optimizing conditions for future use in molecular research.

Dominic T K Keating1, Andrea P Malizia, D Sadlier, C Hurson, A E Wood, J McCarthy, L Nolke, Jim J Egan, Peter P Doran.   

Abstract

The quality of tissue studied impacts greatly on oligonucleotide microarray results, emphasizing the importance of harvesting techniques. The analyzed RNA extracted from human lung samples preserved via 4 different storage conditions (RNAlater, phosphate-buffered saline, TRIzol, liquid nitrogen). RNA was assessed by denaturing gel electrophoresis, Agilent bioanalysis, real-time polymerase chain reaction (PCR), and Test3 Affymetrix chip hybridization. Results revealed better quality RNA from RNAlater samples on gel electrophoresis and bioanalysis. RNAlater samples also showed greater yield (r18s via PCR P < .05) and resulted in better Test3 chips hybridization (p < .05), suggesting RNAlater was superior at preserving lung tissue nucleic acid.

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Year:  2008        PMID: 18850373     DOI: 10.1080/01902140802093162

Source DB:  PubMed          Journal:  Exp Lung Res        ISSN: 0190-2148            Impact factor:   2.459


  5 in total

1.  RNA stability in human liver: comparison of different processing times, temperatures and methods.

Authors:  Serene M L Lee; Celine Schelcher; Sevdije Gashi; Stefanie Schreiber; Reinhard M K Thasler; Karl-Walter Jauch; Wolfgang E Thasler
Journal:  Mol Biotechnol       Date:  2013-01       Impact factor: 2.695

2.  Site-specific differences in gene expression of secreted proteins in the mouse lung: comparison of methods to show differences by location.

Authors:  Katherine M Sutherland; Trenton J Combs; Patricia C Edwards; Laura S Van Winkle
Journal:  J Histochem Cytochem       Date:  2010-09-17       Impact factor: 2.479

3.  Quantification of Human Norovirus GII on Hands of Mothers with Children Under the Age of Five Years in Bagamoyo, Tanzania.

Authors:  Mia Catharine M Mattioli; Jennifer Davis; Mwifadhi Mrisho; Alexandria B Boehm
Journal:  Am J Trop Med Hyg       Date:  2015-07-06       Impact factor: 2.345

4.  Enteric pathogens in stored drinking water and on caregiver's hands in Tanzanian households with and without reported cases of child diarrhea.

Authors:  Mia Catharine Mattioli; Alexandria B Boehm; Jennifer Davis; Angela R Harris; Mwifadhi Mrisho; Amy J Pickering
Journal:  PLoS One       Date:  2014-01-02       Impact factor: 3.240

5.  Impact of different stabilization methods on RT-qPCR results using human lung tissue samples.

Authors:  Margalida Esteva-Socias; Fernando Gómez-Romano; José Antonio Carrillo-Ávila; Alicia Loreto Sánchez-Navarro; Cristina Villena
Journal:  Sci Rep       Date:  2020-02-27       Impact factor: 4.379

  5 in total

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