Literature DB >> 18849450

Distribution of Crenarchaeota representatives in terrestrial hot springs of Russia and Iceland.

Anna A Perevalova1, Tatiana V Kolganova, Nils-Kåre Birkeland, Christa Schleper, Elizaveta A Bonch-Osmolovskaya, Alexander V Lebedinsky.   

Abstract

Culture-independent (PCR with Crenarchaeota-specific primers and subsequent denaturing gradient gel electrophoresis) and culture-dependent approaches were used to study the diversity of Crenarchaeota in terrestrial hot springs of the Kamchatka Peninsula and the Lake Baikal region (Russia) and of Iceland. Among the phylotypes detected there were relatives of both cultured (mainly hyperthermophilic) and uncultured Crenarchaeota. It was found that there is a large and diverse group of uncultured Crenarchaeota that inhabit terrestrial hot springs with moderate temperatures (55 to 70 degrees C). Two of the lineages of this group were given phenotypic characterization, one as a result of cultivation in an enrichment culture and another one after isolation of a pure culture, "Fervidococcus fontis," which proved to be a moderately thermophilic, neutrophilic (optimum pH of 6.0 to 7.5), anaerobic organotroph.

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Year:  2008        PMID: 18849450      PMCID: PMC2607163          DOI: 10.1128/AEM.00972-08

Source DB:  PubMed          Journal:  Appl Environ Microbiol        ISSN: 0099-2240            Impact factor:   4.792


  40 in total

1.  Influence of sulfide and temperature on species composition and community structure of hot spring microbial mats.

Authors:  S Skirnisdottir; G O Hreggvidsson; S Hjörleifsdottir; V T Marteinsson; S K Petursdottir; O Holst; J K Kristjansson
Journal:  Appl Environ Microbiol       Date:  2000-07       Impact factor: 4.792

2.  The Ribosomal Database Project (RDP-II): previewing a new autoaligner that allows regular updates and the new prokaryotic taxonomy.

Authors:  J R Cole; B Chai; T L Marsh; R J Farris; Q Wang; S A Kulam; S Chandra; D M McGarrell; T M Schmidt; G M Garrity; J M Tiedje
Journal:  Nucleic Acids Res       Date:  2003-01-01       Impact factor: 16.971

3.  Geographic barriers isolate endemic populations of hyperthermophilic archaea.

Authors:  Rachel J Whitaker; Dennis W Grogan; John W Taylor
Journal:  Science       Date:  2003-07-24       Impact factor: 47.728

4.  Diversity and abundance of Crenarchaeota in terrestrial habitats studied by 16S RNA surveys and real time PCR.

Authors:  Torsten Ochsenreiter; Drazenka Selezi; Achim Quaiser; Liza Bonch-Osmolovskaya; Christa Schleper
Journal:  Environ Microbiol       Date:  2003-09       Impact factor: 5.491

5.  Towards a natural system of organisms: proposal for the domains Archaea, Bacteria, and Eucarya.

Authors:  C R Woese; O Kandler; M L Wheelis
Journal:  Proc Natl Acad Sci U S A       Date:  1990-06       Impact factor: 11.205

6.  Cultivation of a thermophilic ammonia oxidizing archaeon synthesizing crenarchaeol.

Authors:  José R de la Torre; Christopher B Walker; Anitra E Ingalls; Martin Könneke; David A Stahl
Journal:  Environ Microbiol       Date:  2008-01-19       Impact factor: 5.491

7.  'Touchdown' PCR to circumvent spurious priming during gene amplification.

Authors:  R H Don; P T Cox; B J Wainwright; K Baker; J S Mattick
Journal:  Nucleic Acids Res       Date:  1991-07-25       Impact factor: 16.971

8.  Multiple sequence alignment with hierarchical clustering.

Authors:  F Corpet
Journal:  Nucleic Acids Res       Date:  1988-11-25       Impact factor: 16.971

9.  Caldisphaera lagunensis gen. nov., sp. nov., a novel thermoacidophilic crenarchaeote isolated from a hot spring at Mt Maquiling, Philippines.

Authors:  T Itoh; K Suzuki; P C Sanchez; T Nakase
Journal:  Int J Syst Evol Microbiol       Date:  2003-07       Impact factor: 2.747

10.  [Detection of hyperthermophilic archaea of the genus Desulforococcus by hybridization with oligonucleotide probes].

Authors:  A A Perevalova; A V Lebedinskiĭ; E A Bonch-Osmolovskaia; N A Chernykh
Journal:  Mikrobiologiia       Date:  2003 May-Jun
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  18 in total

1.  Uncultured archaea dominate in the thermal groundwater of Uzon Caldera, Kamchatka.

Authors:  Andrey V Mardanov; Vadim M Gumerov; Alexey V Beletsky; Anna A Perevalova; Gennady A Karpov; Elizaveta A Bonch-Osmolovskaya; Nikolai V Ravin
Journal:  Extremophiles       Date:  2011-04-22       Impact factor: 2.395

2.  Bacterial and archaeal diversity in two hot spring microbial mats from the geothermal region of Tengchong, China.

Authors:  Eulyn Pagaling; William D Grant; Don A Cowan; Brian E Jones; Yanhe Ma; Antonio Ventosa; Shaun Heaphy
Journal:  Extremophiles       Date:  2012-05-24       Impact factor: 2.395

3.  Diversity of Crenarchaeota in terrestrial hot springs in Tengchong, China.

Authors:  Zhao-Qi Song; Jing-Quan Chen; Hong-Chen Jiang; En-Min Zhou; Shu-Kun Tang; Xiao-Yang Zhi; Li-Xin Zhang; Chuan-Lun L Zhang; Wen-Jun Li
Journal:  Extremophiles       Date:  2010-04-07       Impact factor: 2.395

4.  Characteristic of biodiversity of thermophilic microbial community by parallel pyrosequencing method.

Authors:  A V Mardanov; V M Gumerov; A V Beletsky; E A Bonch-Osmolovskaya; N V Ravin; K G Skryabin
Journal:  Dokl Biochem Biophys       Date:  2010 May-Jun       Impact factor: 0.788

5.  Microbial life in Bourlyashchy, the hottest thermal pool of Uzon Caldera, Kamchatka.

Authors:  Nikolay A Chernyh; Andrey V Mardanov; Vadim M Gumerov; Margarita L Miroshnichenko; Alexander V Lebedinsky; Alexander Y Merkel; Douglas Crowe; Nikolay V Pimenov; Igor I Rusanov; Nikolay V Ravin; Mary Ann Moran; Elizaveta A Bonch-Osmolovskaya
Journal:  Extremophiles       Date:  2015-09-08       Impact factor: 2.395

6.  Activity and distribution of thermophilic prokaryotes in hydrothermal fluid, sulfidic structures, and sheaths of alvinellids (East Pacific Rise, 13°N).

Authors:  Elizaveta A Bonch-Osmolovskaya; Anna A Perevalova; Tatiana V Kolganova; Igor I Rusanov; Christian Jeanthon; Nikolay V Pimenov
Journal:  Appl Environ Microbiol       Date:  2011-02-11       Impact factor: 4.792

7.  Microbial diversity and autotrophic activity in Kamchatka hot springs.

Authors:  Alexander Yu Merkel; Nikolay V Pimenov; Igor I Rusanov; Alexander I Slobodkin; Galina B Slobodkina; Ivan Yu Tarnovetckii; Evgeny N Frolov; Arseny V Dubin; Anna A Perevalova; Elizaveta A Bonch-Osmolovskaya
Journal:  Extremophiles       Date:  2016-12-27       Impact factor: 2.395

8.  Bacterial diversity in fumarole environments of the Paricutín volcano, Michoacán (Mexico).

Authors:  Miguel Medrano-Santillana; Elcia Margaret Souza-Brito; Robert Duran; Felix Gutierrez-Corona; Georgina Elena Reyna-López
Journal:  Extremophiles       Date:  2017-03-13       Impact factor: 2.395

9.  Bacterial composition of microbial mats in hot springs in Northern Patagonia: variations with seasons and temperature.

Authors:  Roy Mackenzie; Carlos Pedrós-Alió; Beatriz Díez
Journal:  Extremophiles       Date:  2012-12-04       Impact factor: 2.395

10.  Analysis of the complete genome of Fervidococcus fontis confirms the distinct phylogenetic position of the order Fervidicoccales and suggests its environmental function.

Authors:  Alexander V Lebedinsky; Andrey V Mardanov; Ilya V Kublanov; Vadim M Gumerov; Alexey V Beletsky; Anna A Perevalova; Salima Kh Bidzhieva; Elizaveta A Bonch-Osmolovskaya; Konstantin G Skryabin; Nikolai V Ravin
Journal:  Extremophiles       Date:  2013-12-24       Impact factor: 2.395

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