Literature DB >> 18848915

Understanding chlorophylls: central magnesium ion and phytyl as structural determinants.

Leszek Fiedor1, Agnieszka Kania, Beata Myśliwa-Kurdziel, Łukasz Orzeł, Grazyna Stochel.   

Abstract

Phytol, a C20 alcohol esterifying the C-17(3) propionate, and Mg2+ ion chelated in the central cavity, are conservative structural constituents of chlorophylls. To evaluate their intramolecular structural effects we prepared a series of metal- and phytyl-free derivatives of bacteriochlorophyll a and applied them as model chlorophylls. A detailed spectroscopic study on the model pigments reveals meaningful differences in the spectral characteristics of the phytylated and non-phytylated pigments. Their analysis in terms of solvatochromism and axial coordination shows how the central Mg and phytyl residue shape the properties of the pigment. Surprisingly, the presence/absence of the central Mg has no effect on the solvatochromism of (bacterio)chlorophyll pi-electron system and the hydrophobicity of phytyl does not interfere with the first solvation shell of the chromophore. However, both residues significantly influence the conformation of the pigment macrocycle and the removal of either residue increases the macrocycle flexibility. The chelation of Mg has a flattening effect on the macrocycle whereas bulky phytyl residue seems to control the conformation of the chromophore via steric interactions with ring V and its substituents. The analysis of spectroscopic properties of bacteriochlorophyllide (free acid) shows that esterification of the C-17(3) propionate is necessary in chlorophylls because the carboxyl group may act as a strong chelator of the central Mg. These observations imply that the truncated chlorophylls used in theoretical studies are not adequate as models of native chromophores, especially when fine effects are to be modeled.

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Year:  2008        PMID: 18848915     DOI: 10.1016/j.bbabio.2008.09.005

Source DB:  PubMed          Journal:  Biochim Biophys Acta        ISSN: 0006-3002


  21 in total

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Authors:  Jianzhong Wen; Jiro Harada; Kenny Buyle; Kevin Yuan; Hitoshi Tamiaki; Hirozo Oh-Oka; Richard A Loomis; Robert E Blankenship
Journal:  Biochemistry       Date:  2010-07-06       Impact factor: 3.162

2.  Ligation of water to magnesium chelates of biological importance.

Authors:  Dorota Rutkowska-Zbik; Małgorzata Witko; Leszek Fiedor
Journal:  J Mol Model       Date:  2012-05-29       Impact factor: 1.810

Review 3.  An overview on chlorophylls and quinones in the photosystem I-type reaction centers.

Authors:  Shunsuke Ohashi; Tatsuya Iemura; Naoki Okada; Shingo Itoh; Hayato Furukawa; Masaaki Okuda; Mayumi Ohnishi-Kameyama; Takuro Ogawa; Hideaki Miyashita; Tadashi Watanabe; Shigeru Itoh; Hirozo Oh-oka; Kazuhito Inoue; Masami Kobayashi
Journal:  Photosynth Res       Date:  2010-02-18       Impact factor: 3.573

Review 4.  De novo synthesis of gem-dialkyl chlorophyll analogues for probing and emulating our green world.

Authors:  Jonathan S Lindsey
Journal:  Chem Rev       Date:  2015-06-12       Impact factor: 60.622

5.  Structural characterization of chlorophyll-a by high resolution tandem mass spectrometry.

Authors:  Juan Wei; Huilin Li; Mark P Barrow; Peter B O'Connor
Journal:  J Am Soc Mass Spectrom       Date:  2013-03-16       Impact factor: 3.109

6.  Selective Chlorophyll Removal Method to "Degreen" Botanical Extracts.

Authors:  Seon Beom Kim; Jonathan Bisson; J Brent Friesen; Guido F Pauli; Charlotte Simmler
Journal:  J Nat Prod       Date:  2020-05-19       Impact factor: 4.050

7.  The structure of photosystem I from a high-light-tolerant cyanobacteria.

Authors:  Zachary Dobson; Safa Ahad; Jackson Vanlandingham; Hila Toporik; Natalie Vaughn; Michael Vaughn; Dewight Williams; Michael Reppert; Petra Fromme; Yuval Mazor
Journal:  Elife       Date:  2021-08-26       Impact factor: 8.140

8.  Top-Down Mass Spectrometry Analysis of Membrane-Bound Light-Harvesting Complex 2 from Rhodobacter sphaeroides.

Authors:  Yue Lu; Hao Zhang; Weidong Cui; Rafael Saer; Haijun Liu; Michael L Gross; Robert E Blankenship
Journal:  Biochemistry       Date:  2015-12-02       Impact factor: 3.162

Review 9.  A viewpoint: why chlorophyll a?

Authors:  Lars Olof Björn; George C Papageorgiou; Robert E Blankenship
Journal:  Photosynth Res       Date:  2009-01-06       Impact factor: 3.573

Review 10.  The unique photophysical properties of the Peridinin-Chlorophyll-α-Protein.

Authors:  Donatella Carbonera; Marilena Di Valentin; Riccardo Spezia; Alberto Mezzetti
Journal:  Curr Protein Pept Sci       Date:  2014       Impact factor: 3.272

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