Literature DB >> 18848867

The mitochondrial genome sequence of Enterobius vermicularis (Nematoda: Oxyurida)--an idiosyncratic gene order and phylogenetic information for chromadorean nematodes.

Seokha Kang1, Tahera Sultana, Keeseon S Eom, Yung Chul Park, Nathan Soonthornpong, Steven A Nadler, Joong-Ki Park.   

Abstract

The complete mitochondrial genome sequence was determined for the human pinworm Enterobius vermicularis (Oxyurida: Nematoda) and used to infer its phylogenetic relationship to other major groups of chromadorean nematodes. The E. vermicularis genome is a 14,010-bp circular DNA molecule that encodes 36 genes (12 proteins, 22 tRNAs, and 2 rRNAs). This mtDNA genome lacks atp8, as reported for almost all other nematode species investigated. Phylogenetic analyses (maximum parsimony, maximum likelihood, neighbor joining, and Bayesian inference) of nucleotide sequences for the 12 protein-coding genes of 25 nematode species placed E. vermicularis, a representative of the order Oxyurida, as sister to the main Ascaridida+Rhabditida group. Tree topology comparisons using statistical tests rejected an alternative hypothesis favoring a closer relationship among Ascaridida, Spirurida, and Oxyurida, which has been supported from most studies based on nuclear ribosomal DNA sequences. Unlike the relatively conserved gene arrangement found for most chromadorean taxa, E. vermicularis mtDNA gene order is very unique, not sharing similarity to any other nematode species reported to date. This lack of gene order similarity may represent idiosyncratic gene rearrangements unique to this specific lineage of the oxyurids. To more fully understand the extent of gene rearrangement and its evolutionary significance within the nematode phylogenetic framework, additional mitochondrial genomes representing a greater evolutionary diversity of species must be characterized.

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Year:  2008        PMID: 18848867     DOI: 10.1016/j.gene.2008.09.011

Source DB:  PubMed          Journal:  Gene        ISSN: 0378-1119            Impact factor:   3.688


  22 in total

1.  Molecular phylogenetic analysis of Enterobius vermicularis and development of an 18S ribosomal DNA-targeted diagnostic PCR.

Authors:  Ulrike E Zelck; Ralf Bialek; Michael Weiss
Journal:  J Clin Microbiol       Date:  2011-01-19       Impact factor: 5.948

2.  The complete mitochondrial genome of rabbit pinworm Passalurus ambiguus: genome characterization and phylogenetic analysis.

Authors:  Guo-Hua Liu; Sheng Li; Feng-Cai Zou; Chun-Ren Wang; Xing-Quan Zhu
Journal:  Parasitol Res       Date:  2015-10-16       Impact factor: 2.289

3.  The complete mitochondrial genome of the rodent intra-arterial nematodes Angiostrongylus cantonensis and Angiostrongylus costaricensis.

Authors:  Shan Lv; Yi Zhang; Ling Zhang; Qin Liu; He-Xiang Liu; Ling Hu; Fu-Rong Wei; Peter Steinmann; Carlos Graeff-Teixeira; Xiao-Nong Zhou; Jürg Utzinger
Journal:  Parasitol Res       Date:  2012-01-13       Impact factor: 2.289

4.  Sensitivity of Ribosomal RNA Character Sampling in the Phylogeny of Rhabditida.

Authors:  Oleksandr Holovachov; Lauren Camp; Steven A Nadler
Journal:  J Nematol       Date:  2015-12       Impact factor: 1.402

5.  Morphological and Molecular Characteristics of the Gastro-Intestinal Nematode Parasite Ascaridia columbae Infecting the Domestic Pigeon Columba livia domestica in Saudi Arabia.

Authors:  Saleh Al Quraishy; Rewaida Abdel-Gaber; Mohamed A Dkhil; Khulud Alzuabi
Journal:  Acta Parasitol       Date:  2019-12-12       Impact factor: 1.440

6.  The complete mitochondrial genome of Koerneria sudhausi (Diplogasteromorpha: Nematoda) supports monophyly of Diplogasteromorpha within Rhabditomorpha.

Authors:  Taeho Kim; Jiyeon Kim; Steven A Nadler; Joong-Ki Park
Journal:  Curr Genet       Date:  2015-11-18       Impact factor: 3.886

7.  The mitogenome of Ophidascaris wangi isolated from snakes in China.

Authors:  Cheng-Yan Zhou; Jun Ma; Qi-Wu Tang; Xing-Quan Zhu; Qian-Ming Xu
Journal:  Parasitol Res       Date:  2021-03-23       Impact factor: 2.289

8.  The complete mitochondrial genomes of three parasitic nematodes of birds: a unique gene order and insights into nematode phylogeny.

Authors:  Guo-Hua Liu; Renfu Shao; Jia-Yuan Li; Dong-Hui Zhou; Hu Li; Xing-Quan Zhu
Journal:  BMC Genomics       Date:  2013-06-21       Impact factor: 3.969

9.  An integrated pipeline for next-generation sequencing and annotation of mitochondrial genomes.

Authors:  Aaron R Jex; Ross S Hall; D Timothy J Littlewood; Robin B Gasser
Journal:  Nucleic Acids Res       Date:  2009-11-05       Impact factor: 16.971

10.  Comparative analysis of complete mitochondrial genome sequences confirms independent origins of plant-parasitic nematodes.

Authors:  Tahera Sultana; Jiyeon Kim; Sang-Hwa Lee; Hyerim Han; Sanghee Kim; Gi-Sik Min; Steven A Nadler; Joogn-Ki Park
Journal:  BMC Evol Biol       Date:  2013-01-18       Impact factor: 3.260

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