Literature DB >> 18844376

Structural characterization of a thiazoline-containing chromophore in an orange fluorescent protein, monomeric Kusabira Orange.

Akihiro Kikuchi1, Eiko Fukumura, Satoshi Karasawa, Hideaki Mizuno, Atsushi Miyawaki, Yoshitsugu Shiro.   

Abstract

Monomeric Kusabira Orange (mKO) is a green fluorescent protein (GFP)-like protein that emits orange light at a peak of 559 nm. We analyzed its X-ray structure at 1.65 A and found a novel three-ring chromophore that developed autocatalytically from a Cys65-Tyr66-Glu67 tripeptide in which the side chain of Cys65 formed the third 2-hydroxy-3-thiazoline ring. As a result, the chromophore contained the CNCOH group at the 2-position of the imidazolinone moiety such that the conjugated pi-electron system of the chromophore was more extended than that of GFP but less extended than that of the Discosoma sp. red fluorescent protein (DsRed). Since a sulfur atom has potent nucleophilic character, the third 3-thiazoline ring is rapidly and completely cyclized. Furthermore, our structure reveals the presence of a pi-pi stacking interaction between His197 and the chromophore as well as a pi-cation interaction between Arg69 and the chromophore. These structural findings are sufficient to account for the orange emission, pH tolerance, and photostability of mKO.

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Year:  2008        PMID: 18844376     DOI: 10.1021/bi800727v

Source DB:  PubMed          Journal:  Biochemistry        ISSN: 0006-2960            Impact factor:   3.162


  19 in total

1.  ADP-ribosylation factor machinery mediates endocytosis in plant cells.

Authors:  Satoshi Naramoto; Jürgen Kleine-Vehn; Stéphanie Robert; Masaru Fujimoto; Tomoko Dainobu; Tomasz Paciorek; Takashi Ueda; Akihiko Nakano; Marc C E Van Montagu; Hiroo Fukuda; Jirí Friml
Journal:  Proc Natl Acad Sci U S A       Date:  2010-11-30       Impact factor: 11.205

Review 2.  Fluorescence lifetime imaging microscopy in the medical sciences.

Authors:  René Ebrecht; Craig Don Paul; Fred S Wouters
Journal:  Protoplasma       Date:  2014-01-04       Impact factor: 3.356

3.  Dimerization-dependent green and yellow fluorescent proteins.

Authors:  Spencer C Alford; Yidan Ding; Thomas Simmen; Robert E Campbell
Journal:  ACS Synth Biol       Date:  2012-08-14       Impact factor: 5.110

Review 4.  Green fluorescent protein: a perspective.

Authors:  S James Remington
Journal:  Protein Sci       Date:  2011-07-19       Impact factor: 6.725

5.  Extrusion of mitochondrial contents from lipopolysaccharide-stimulated cells: Involvement of autophagy.

Authors:  Kana Unuma; Toshihiko Aki; Takeshi Funakoshi; Kyoko Hashimoto; Koichi Uemura
Journal:  Autophagy       Date:  2015       Impact factor: 16.016

Review 6.  Chromophore transformations in red fluorescent proteins.

Authors:  Fedor V Subach; Vladislav V Verkhusha
Journal:  Chem Rev       Date:  2012-05-04       Impact factor: 60.622

Review 7.  The fluorescent protein palette: tools for cellular imaging.

Authors:  Richard N Day; Michael W Davidson
Journal:  Chem Soc Rev       Date:  2009-08-04       Impact factor: 54.564

8.  Color hues in red fluorescent proteins are due to internal quadratic Stark effect.

Authors:  Mikhail Drobizhev; Shane Tillo; Nikolay S Makarov; Thomas E Hughes; Aleksander Rebane
Journal:  J Phys Chem B       Date:  2009-10-01       Impact factor: 2.991

9.  Structural Consequences of Chromophore Formation and Exploration of Conserved Lid Residues amongst Naturally Occurring Fluorescent Proteins.

Authors:  Matthew H Zimmer; Binsen Li; Ramza S Shahid; Paola Peshkepija; Marc Zimmer
Journal:  Chem Phys       Date:  2014-01-31       Impact factor: 2.348

Review 10.  Red fluorescent proteins: chromophore formation and cellular applications.

Authors:  Atsushi Miyawaki; Daria M Shcherbakova; Vladislav V Verkhusha
Journal:  Curr Opin Struct Biol       Date:  2012-09-20       Impact factor: 6.809

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