Literature DB >> 18842866

Sphingopyxis marina sp. nov. and Sphingopyxis litoris sp. nov., isolated from seawater.

Bong-Soo Kim1, Young Woon Lim, Jongsik Chun.   

Abstract

Two yellow-pigmented, Gram-negative, aerobic bacterial strains, designated FR1087(T) and FR1093(T), were isolated from surface seawater off Jeju Island, Republic of Korea. Both strains required sea salts for growth. Phylogenetic analysis based on 16S rRNA gene sequences indicated that the two isolates belong to the genus Sphingopyxis, showing the highest level of sequence similarity with respect to Sphingopyxis flavimaris SW-151(T) (97.9 %). The two isolates shared 98.5 % sequence similarity. DNA-DNA hybridization between the isolates and the type strain of Sphingopyxis flavimaris clearly suggested that strains FR1087(T) and FR1093(T) represent two separate novel species in the genus Sphingopyxis. Several phenotypic characteristics served to differentiate these two isolates from recognized members of the genus Sphingopyxis. The data from the polyphasic study presented here indicated that strains FR1087(T) and FR1093(T) should be classified as representing novel species in the genus Sphingopyxis, for which the names Sphingopyxis marina sp. nov. and Sphingopyxis litoris sp. nov., respectively, are proposed. The type strain of Sphingopyxis marina sp. nov. is FR1087(T) (=IMSNU 14132(T)=KCTC 12763(T)=JCM 14161(T)) and the type strain of Sphingopyxis litoris sp. nov. is FR1093(T) (=IMSNU 14133(T)=KCTC 12764(T)=JCM 14162(T)).

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Year:  2008        PMID: 18842866     DOI: 10.1099/ijs.0.65614-0

Source DB:  PubMed          Journal:  Int J Syst Evol Microbiol        ISSN: 1466-5026            Impact factor:   2.747


  6 in total

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Journal:  Arch Microbiol       Date:  2022-06-20       Impact factor: 2.552

2.  Draft Genome Sequence of Sphingopyxis sp. Strain MWB1, a Crude-Oil-Degrading Marine Bacterium.

Authors:  Jonghyun Kim; Soo Jung Kim; Seon Hee Kim; Seung Il Kim; Yoon-Jung Moon; Sung-Joon Park; Hyung-Yeel Kahng; Young-Ho Chung
Journal:  Genome Announc       Date:  2014-12-04

3.  Draft Genome Sequence of Sphingorhabdus sp. Strain EL138, a Metabolically Versatile Alphaproteobacterium Isolated from the Gorgonian Coral Eunicella labiata.

Authors:  Sandra Godinho Silva; Asunción Lago-Lestón; Rodrigo Costa; Tina Keller-Costa
Journal:  Genome Announc       Date:  2018-03-01

4.  Gene probing reveals the widespread distribution, diversity and abundance of isoprene-degrading bacteria in the environment.

Authors:  Ornella Carrión; Nasmille L Larke-Mejía; Lisa Gibson; Muhammad Farhan Ul Haque; Javier Ramiro-García; Terry J McGenity; J Colin Murrell
Journal:  Microbiome       Date:  2018-12-07       Impact factor: 14.650

5.  Draft Genome Sequence of Two Sphingopyxis sp. Strains, Dominant Members of the Bacterial Community Associated with a Drinking Water Distribution System Simulator.

Authors:  Vicente Gomez-Alvarez; Stacy Pfaller; Randy P Revetta
Journal:  Genome Announc       Date:  2016-03-31

6.  Phylogenetically Diverse Aerobic Anoxygenic Phototrophic Bacteria Isolated from Epilithic Biofilms in Tama River, Japan.

Authors:  Setsuko Hirose; Katsumi Matsuura; Shin Haruta
Journal:  Microbes Environ       Date:  2016-07-23       Impact factor: 2.912

  6 in total

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