Literature DB >> 18842855

Halomicrobium katesii sp. nov., an extremely halophilic archaeon.

Karima Kharroub1, Catherine Lizama, Margarita Aguilera, Abderrahmane Boulahrouf, Victoriano Campos, Alberto Ramos-Cormenzana, Mercedes Monteoliva-Sánchez.   

Abstract

Two extremely halophilic archaea, strains Al-5(T) and K-1, were isolated from Lake Tebenquiche (Atacama Saltern, Chile) and Ezzemoul sabkha (Algeria), respectively. Cells of the two strains were short-rod-shaped and Gram-negative; colonies were orange-pigmented. They grew optimally at 37-40 degrees C and pH 7.0-7.5 in the presence of 25 % (w/v) NaCl. Magnesium was not required. Polar lipid analysis revealed the presence of phosphatidylglycerol and phosphatidylglycerophosphate methyl ester, the absence of phosphatidylglycerosulfate, and the presence of sulfated diglycosyl diether and diether diglycosyl as the sole glycolipids. DNA G+C contents of strains Al-5(T) and K-1 were 52.4 and 52.9 mol% (T(m) method), respectively. 16S rRNA gene sequence comparison with database sequences showed that strains Al-5(T) and K-1 were most closely related to Halomicrobium mukohataei DSM 12286(T) (similarities of 97.5 and 96.9 %, respectively). DNA-DNA hybridization indicated that strains Al-5(T) and K-1 were members of a single species. However, DNA-DNA relatedness to Halomicrobium mukohataei was 55.7+/-2.5 %. A comparative analysis of phenotypic characteristics and DNA-DNA hybridization between the isolates and Halomicrobium mukohataei DSM 12286(T) supported the conclusion that Al-5(T) and K-1 represent a novel species within the genus Halomicrobium, for which the name Halomicrobium katesii sp. nov. is proposed. The type strain is Al-5(T) (=CECT 7257(T)=DSM 19301(T)).

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Year:  2008        PMID: 18842855     DOI: 10.1099/ijs.0.65662-0

Source DB:  PubMed          Journal:  Int J Syst Evol Microbiol        ISSN: 1466-5026            Impact factor:   2.747


  3 in total

1.  Complete genome sequence of Halomicrobium mukohataei type strain (arg-2).

Authors:  Brian J Tindall; Susanne Schneider; Alla Lapidus; Alex Copeland; Tijana Glavina Del Rio; Matt Nolan; Susan Lucas; Feng Chen; Hope Tice; Jan-Fang Cheng; Elizabeth Saunders; David Bruce; Lynne Goodwin; Sam Pitluck; Natalia Mikhailova; Amrita Pati; Natalia Ivanova; Konstantinos Mavrommatis; Amy Chen; Krishna Palaniappan; Patrick Chain; Miriam Land; Loren Hauser; Yun-Juan Chang; Cynthia D Jeffries; Thomas Brettin; Cliff Han; Manfred Rohde; Markus Göker; Jim Bristow; Jonathan A Eisen; Victor Markowitz; Philip Hugenholtz; Hans-Peter Klenk; Nikos C Kyrpides; John C Detter
Journal:  Stand Genomic Sci       Date:  2009-11-22

2.  Assessment of 16S rRNA Gene-Based Phylogenetic Diversity of Archaeal Communities in Halite-Crystal Salts Processed from Natural Saharan Saline Systems of Southern Tunisia.

Authors:  Afef Najjari; Panagiota Stathopoulou; Khaled Elmnasri; Faten Hasnaoui; Ines Zidi; Haitham Sghaier; Hadda Imene Ouzari; Ameur Cherif; George Tsiamis
Journal:  Biology (Basel)       Date:  2021-05-04

3.  Occurrence of viable, red-pigmented haloarchaea in the plumage of captive flamingoes.

Authors:  Kyung June Yim; Joseph Kwon; In-Tae Cha; Kyung-Seo Oh; Hye Seon Song; Hae-Won Lee; Jin-Kyu Rhee; Eun-Ji Song; Jeong Rae Rho; Mi Lyu Seo; Jong-Soon Choi; Hak-Jong Choi; Sung-Jae Lee; Young-Do Nam; Seong Woon Roh
Journal:  Sci Rep       Date:  2015-11-10       Impact factor: 4.379

  3 in total

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