Literature DB >> 18842839

Rheinheimera soli sp. nov., a gammaproteobacterium isolated from soil in Korea.

Seung Hyun Ryu1, Bok Sil Chung, Minjeong Park, Seung Sik Lee, Sang-Suk Lee, Che Ok Jeon.   

Abstract

A Gram-negative, non-spore-forming bacterium, designated strain BD-d46(T), was isolated from a playground soil sample in Jinju, South Korea. Cells were straight or curved rods and showed catalase- and oxidase-positive reactions. Growth of strain BD-d46(T) was observed between 15 and 35 degrees C (optimum 25-30 degrees C) and between pH 6.5 and 8.0 (optimum pH 7.0-7.5). The predominant fatty acids were summed feature 3 (C(16 : 1)omega7c and/or iso-C(15 : 0) 2-OH), C(12 : 0) 3-OH and C(16 : 0). Strain BD-d46(T) contained phosphatidylethanolamine and phosphatidylglycerol as major polar lipids. Isoprenoid quinones were Q-8 (75 %) and MK-7 (25 %). The G+C content of the genomic DNA was 49.2 mol%. Phylogenetic analysis based on 16S rRNA gene sequences showed that strain BD-d46(T) formed a distinct lineage with Rheinheimera chironomi K19414(T) within the genus Rheinheimera. Levels of 16S rRNA gene sequence similarity between strain BD-d46(T) and the type strains of recognized Rheinheimera species ranged from 94.4 to 96.9 %. On the basis of chemotaxonomic data and molecular properties, strain BD-d46(T) is considered to represent a novel species of the genus Rheinheimera, for which the name Rheinheimera soli sp. nov. is proposed. The type strain is BD-d46(T) (=KCTC 22077(T) =DSM 19413(T)).

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Year:  2008        PMID: 18842839     DOI: 10.1099/ijs.0.65489-0

Source DB:  PubMed          Journal:  Int J Syst Evol Microbiol        ISSN: 1466-5026            Impact factor:   2.747


  5 in total

1.  Genome sequence of Rheinheimera sp. strain A13L, isolated from Pangong Lake, India.

Authors:  Hemant Kumar Gupta; Rinkoo Devi Gupta; Ajit Singh; Nar Singh Chauhan; Rakesh Sharma
Journal:  J Bacteriol       Date:  2011-07-08       Impact factor: 3.490

2.  Rheinheimera gaetbuli sp. nov., a Marine Bacterium Isolated from a Tidal Flat.

Authors:  Kyunghwa Baek; Che Ok Jeon
Journal:  Curr Microbiol       Date:  2015-12-11       Impact factor: 2.188

3.  Genome Sequence of Rheinheimera salexigens sp. nov. Isolated from a Fishing Hook off O'ahu, Hawai'i.

Authors:  Xuehua Wan; Shaobin Hou; Kazukuni Hayashi; James Anderson; Stuart P Donachie
Journal:  Genome Announc       Date:  2016-12-15

4.  Genomic and Seasonal Variations among Aquatic Phages Infecting the Baltic Sea Gammaproteobacterium Rheinheimera sp. Strain BAL341.

Authors:  E Nilsson; K Li; J Fridlund; S Šulčius; C Bunse; C M G Karlsson; M Lindh; D Lundin; J Pinhassi; K Holmfeldt
Journal:  Appl Environ Microbiol       Date:  2019-08-29       Impact factor: 4.792

5.  Draft Genome Sequence of Rheinheimera sp. Strain SA_1 Isolated from Iron Backwash Sludge in Germany.

Authors:  Josephin Schröder; Burga Braun; Karsten Liere; Ulrich Szewzyk
Journal:  Genome Announc       Date:  2016-08-18
  5 in total

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