Literature DB >> 18834110

Pharmacophore modeling and molecular docking led to the discovery of inhibitors of human immunodeficiency virus-1 replication targeting the human cellular aspartic acid-glutamic acid-alanine-aspartic acid box polypeptide 3.

Giovanni Maga1, Federico Falchi, Anna Garbelli, Amalia Belfiore, Myriam Witvrouw, Fabrizio Manetti, Maurizio Botta.   

Abstract

HIV-1 replication has been inhibited by using a compound able to target the human cellular cofactor DEAD-box ATPase DDX3, essential for HIV-1 RNA nuclear export. This compound, identified by means of a computational protocol based on pharmacophoric modeling and molecular docking calculations, represents the first small molecule with such a mechanism of action and could lay the foundations for a pioneering approach for the treatment of HIV-1 infections.

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Year:  2008        PMID: 18834110     DOI: 10.1021/jm8008844

Source DB:  PubMed          Journal:  J Med Chem        ISSN: 0022-2623            Impact factor:   7.446


  32 in total

Review 1.  Cellular RNA helicases and HIV-1: insights from genome-wide, proteomic, and molecular studies.

Authors:  Chia-Yen Chen; Xiang Liu; Kathleen Boris-Lawrie; Amit Sharma; Kuan-Teh Jeang
Journal:  Virus Res       Date:  2012-07-16       Impact factor: 3.303

2.  MOLIERE: Automatic Biomedical Hypothesis Generation System.

Authors:  Justin Sybrandt; Michael Shtutman; Ilya Safro
Journal:  KDD       Date:  2017-08

3.  Identification of RNA-protein interaction networks involved in the norovirus life cycle.

Authors:  Surender Vashist; Luis Urena; Yasmin Chaudhry; Ian Goodfellow
Journal:  J Virol       Date:  2012-08-29       Impact factor: 5.103

4.  Exploring the Implication of DDX3X in DENV Infection: Discovery of the First-in-Class DDX3X Fluorescent Inhibitor.

Authors:  Annalaura Brai; Adele Boccuto; Martina Monti; Serena Marchi; Ilaria Vicenti; Francesco Saladini; Claudia Immacolata Trivisani; Alessandro Pollutri; Claudia Maria Trombetta; Emanuele Montomoli; Valentina Riva; Anna Garbelli; Emanuele Maria Nola; Maurizio Zazzi; Giovanni Maga; Elena Dreassi; Maurizio Botta
Journal:  ACS Med Chem Lett       Date:  2020-04-09       Impact factor: 4.345

5.  Evolutionary constraints acting on DDX3X protein potentially interferes with Rev-mediated nuclear export of HIV-1 RNA.

Authors:  Deepak Sharma; Jayanta Bhattacharya
Journal:  PLoS One       Date:  2010-03-15       Impact factor: 3.240

6.  Human DDX3 protein is a valuable target to develop broad spectrum antiviral agents.

Authors:  Annalaura Brai; Roberta Fazi; Cristina Tintori; Claudio Zamperini; Francesca Bugli; Maurizio Sanguinetti; Egidio Stigliano; José Esté; Roger Badia; Sandra Franco; Miguel A Martinez; Javier P Martinez; Andreas Meyerhans; Francesco Saladini; Maurizio Zazzi; Anna Garbelli; Giovanni Maga; Maurizio Botta
Journal:  Proc Natl Acad Sci U S A       Date:  2016-04-26       Impact factor: 11.205

Review 7.  Targeting RNA helicases in cancer: The translation trap.

Authors:  Marise R Heerma van Voss; Paul J van Diest; Venu Raman
Journal:  Biochim Biophys Acta Rev Cancer       Date:  2017-09-28       Impact factor: 10.680

8.  PLGA nanoparticle formulation of RK-33: an RNA helicase inhibitor against DDX3.

Authors:  Guus Martinus Bol; Raheela Khan; Marise Rosa Heerma van Voss; Saritha Tantravedi; Dorian Korz; Yoshinori Kato; Venu Raman
Journal:  Cancer Chemother Pharmacol       Date:  2015-09-02       Impact factor: 3.333

Review 9.  RNA Helicase DDX3: A Double-Edged Sword for Viral Replication and Immune Signaling.

Authors:  Tomás Hernández-Díaz; Fernando Valiente-Echeverría; Ricardo Soto-Rifo
Journal:  Microorganisms       Date:  2021-06-03

10.  Expression of the RNA helicase DDX3 and the hypoxia response in breast cancer.

Authors:  Guus M Bol; Venu Raman; Petra van der Groep; Jeroen F Vermeulen; Arvind H Patel; Elsken van der Wall; Paul J van Diest
Journal:  PLoS One       Date:  2013-05-16       Impact factor: 3.240

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