Literature DB >> 18823983

The fully oxidized form of the cytochrome bd quinol oxidase from E. coli does not participate in the catalytic cycle: direct evidence from rapid kinetics studies.

Ke Yang1, Vitaliy B Borisov, Alexander A Konstantinov, Robert B Gennis.   

Abstract

Cytochrome bd catalyzes the two-electron oxidation of either ubiquinol or menaquinol and the four-electron reduction of O(2) to H(2)O. In the current work, the rates of reduction of the fully oxidized and oxoferryl forms of the enzyme by the 2-electron donor ubiquinol-1 and single electron donor N,N,N',N'-tetramethyl-p-phenylendiamine (TMPD) have been examined by stopped-flow techniques. Reduction of the all-ferric form of the enzyme is 1000-fold slower than required for a step in the catalytic cycle, whereas the observed rates of reduction of the oxoferryl and singly-reduced forms of the cytochrome are consistent with the catalytic turnover. The data support models of the catalytic cycle which do not include the fully oxidized form of the enzyme as an intermediate.

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Year:  2008        PMID: 18823983      PMCID: PMC2584447          DOI: 10.1016/j.febslet.2008.09.038

Source DB:  PubMed          Journal:  FEBS Lett        ISSN: 0014-5793            Impact factor:   4.124


  21 in total

1.  Interplay between three global regulatory proteins mediates oxygen regulation of the Escherichia coli cytochrome d oxidase (cydAB) operon.

Authors:  F Govantes; A V Orjalo; R P Gunsalus
Journal:  Mol Microbiol       Date:  2000-12       Impact factor: 3.501

Review 2.  Redundancy of aerobic respiratory chains in bacteria? Routes, reasons and regulation.

Authors:  R K Poole; G M Cook
Journal:  Adv Microb Physiol       Date:  2000       Impact factor: 3.517

3.  Simultaneous determination of hemes a, b, and c from pyridine hemochrome spectra.

Authors:  E A Berry; B L Trumpower
Journal:  Anal Biochem       Date:  1987-02-15       Impact factor: 3.365

4.  Site-directed mutation of the highly conserved region near the Q-loop of the cytochrome bd quinol oxidase from Escherichia coli specifically perturbs heme b595.

Authors:  J Zhang; P Hellwig; J P Osborne; H W Huang ; P Moënne-Loccoz; A A Konstantinov; R B Gennis
Journal:  Biochemistry       Date:  2001-07-24       Impact factor: 3.162

5.  Coulometric and spectroscopic analysis of the purified cytochrome d complex of Escherichia coli: evidence for the identification of "cytochrome a1" as cytochrome b595.

Authors:  R M Lorence; J G Koland; R B Gennis
Journal:  Biochemistry       Date:  1986-05-06       Impact factor: 3.162

6.  The nucleotide sequence of the cyd locus encoding the two subunits of the cytochrome d terminal oxidase complex of Escherichia coli.

Authors:  G N Green; H Fang; R J Lin; G Newton; M Mather; C D Georgiou; R B Gennis
Journal:  J Biol Chem       Date:  1988-09-15       Impact factor: 5.157

7.  Strong excitonic interactions in the oxygen-reducing site of bd-type oxidase: the Fe-to-Fe distance between hemes d and b595 is 10 A.

Authors:  Alexander M Arutyunyan; Vitaliy B Borisov; Vladimir I Novoderezhkin; Josh Ghaim; Jie Zhang; Robert B Gennis; Alexander A Konstantinov
Journal:  Biochemistry       Date:  2008-01-19       Impact factor: 3.162

8.  The room temperature reaction of carbon monoxide and oxygen with the cytochrome bd quinol oxidase from Escherichia coli.

Authors:  B C Hill; J J Hill; R B Gennis
Journal:  Biochemistry       Date:  1994-12-20       Impact factor: 3.162

9.  [Oxygenated cytochrome bd from Escherichia coli could be transformed into an oxidized form by lipophilic electron acceptors].

Authors:  V B Borisov; I A Smirnova; I A Krasnosel'skaia; A A Konstantinov
Journal:  Biokhimiia       Date:  1994-04

10.  The purification and characterization of the cytochrome d terminal oxidase complex of the Escherichia coli aerobic respiratory chain.

Authors:  M J Miller; R B Gennis
Journal:  J Biol Chem       Date:  1983-08-10       Impact factor: 5.157

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  12 in total

1.  Oxoferryl-porphyrin radical catalytic intermediate in cytochrome bd oxidases protects cells from formation of reactive oxygen species.

Authors:  Angela Paulus; Sebastiaan Gijsbertus Hendrik Rossius; Madelon Dijk; Simon de Vries
Journal:  J Biol Chem       Date:  2012-01-27       Impact factor: 5.157

Review 2.  The cytochrome bd respiratory oxygen reductases.

Authors:  Vitaliy B Borisov; Robert B Gennis; James Hemp; Michael I Verkhovsky
Journal:  Biochim Biophys Acta       Date:  2011-07-01

3.  The diheme cytochrome c(4) from Vibrio cholerae is a natural electron donor to the respiratory cbb(3) oxygen reductase.

Authors:  Hsin-Yang Chang; Young Ahn; Laura A Pace; Myat T Lin; Yun-Hui Lin; Robert B Gennis
Journal:  Biochemistry       Date:  2010-09-07       Impact factor: 3.162

Review 4.  Bioenergetics and Reactive Nitrogen Species in Bacteria.

Authors:  Vitaliy B Borisov; Elena Forte
Journal:  Int J Mol Sci       Date:  2022-06-30       Impact factor: 6.208

5.  Hydroxyurea induces hydroxyl radical-mediated cell death in Escherichia coli.

Authors:  Bryan W Davies; Michael A Kohanski; Lyle A Simmons; Jonathan A Winkler; James J Collins; Graham C Walker
Journal:  Mol Cell       Date:  2009-12-11       Impact factor: 17.970

6.  Functional importance of Glutamate-445 and Glutamate-99 in proton-coupled electron transfer during oxygen reduction by cytochrome bd from Escherichia coli.

Authors:  Ranjani Murali; Robert B Gennis
Journal:  Biochim Biophys Acta Bioenerg       Date:  2018-04-30       Impact factor: 3.991

Review 7.  Bacterial Oxidases of the Cytochrome bd Family: Redox Enzymes of Unique Structure, Function, and Utility As Drug Targets.

Authors:  Vitaliy B Borisov; Sergey A Siletsky; Alessandro Paiardini; David Hoogewijs; Elena Forte; Alessandro Giuffrè; Robert K Poole
Journal:  Antioxid Redox Signal       Date:  2020-11-09       Impact factor: 7.468

Review 8.  Adaptation of Vibrio cholerae to Hypoxic Environments.

Authors:  Emilio Bueno; Víctor Pinedo; Felipe Cava
Journal:  Front Microbiol       Date:  2020-04-29       Impact factor: 5.640

9.  Amino acids as wetting agents: surface translocation by Porphyromonas gingivalis.

Authors:  M Fata Moradali; Shirin Ghods; Thomas E Angelini; Mary Ellen Davey
Journal:  ISME J       Date:  2019-02-19       Impact factor: 10.302

10.  A biochemical approach to study the role of the terminal oxidases in aerobic respiration in Shewanella oneidensis MR-1.

Authors:  Sébastien Le Laz; Arlette Kpebe; Marielle Bauzan; Sabrina Lignon; Marc Rousset; Myriam Brugna
Journal:  PLoS One       Date:  2014-01-22       Impact factor: 3.240

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