Literature DB >> 18817380

Alternative polyadenylation: a twist on mRNA 3' end formation.

Carol S Lutz1.   

Abstract

Regulation of gene expression by RNA processing mechanisms is now understood to be an important level of control in mammalian cells. Regulation at the level of RNA transcription, splicing, polyadenylation, nucleo-cytoplasmic transport, and translation into polypeptides has been well-studied. Alternative RNA processing events, such as alternative splicing, also have been recognized as key contributors to the complexity of mammalian gene expression. Pre-messenger RNAs (pre-mRNAs) may be polyadenylated in several different ways due to more than one polyadenylation signal, allowing a single gene to encode multiple mRNA transcripts. However, alternative polyadenylation has only recently taken the field as a major player in gene regulation. This review summarizes what is currently known about alternative polyadenylation. It covers results from bioinformatics, as well as those from investigations of viral and tissue-specific studies and, importantly, will set the stage for what is yet to come.

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Year:  2008        PMID: 18817380     DOI: 10.1021/cb800138w

Source DB:  PubMed          Journal:  ACS Chem Biol        ISSN: 1554-8929            Impact factor:   5.100


  80 in total

Review 1.  Alternative mRNA polyadenylation in eukaryotes: an effective regulator of gene expression.

Authors:  Carol S Lutz; Alexandra Moreira
Journal:  Wiley Interdiscip Rev RNA       Date:  2011 Jan-Feb       Impact factor: 9.957

2.  A dominant role for meiosis-specific 3' RNA processing in controlling expression of a fission yeast cyclin gene.

Authors:  Kristine Potter; Nicole Cremona; Sham Sunder; Jo Ann Wise
Journal:  RNA       Date:  2012-05-30       Impact factor: 4.942

3.  Noncanonical transcript forms in yeast and their regulation during environmental stress.

Authors:  Oh Kyu Yoon; Rachel B Brem
Journal:  RNA       Date:  2010-04-26       Impact factor: 4.942

Review 4.  To polyadenylate or to deadenylate: that is the question.

Authors:  Xiaokan Zhang; Anders Virtanen; Frida E Kleiman
Journal:  Cell Cycle       Date:  2010-11-15       Impact factor: 4.534

Review 5.  Single-molecule direct RNA sequencing without cDNA synthesis.

Authors:  Fatih Ozsolak; Patrice M Milos
Journal:  Wiley Interdiscip Rev RNA       Date:  2011-03-14       Impact factor: 9.957

Review 6.  Pre-mRNA 3'-end processing complex assembly and function.

Authors:  Serena Chan; Eun-A Choi; Yongsheng Shi
Journal:  Wiley Interdiscip Rev RNA       Date:  2010-10-18       Impact factor: 9.957

7.  Coordinated post-transcriptional regulation of Hsp70.3 gene expression by microRNA and alternative polyadenylation.

Authors:  Michael Tranter; Robert N Helsley; Waltke R Paulding; Michael McGuinness; Cole Brokamp; Lauren Haar; Yong Liu; Xiaoping Ren; W Keith Jones
Journal:  J Biol Chem       Date:  2011-07-08       Impact factor: 5.157

8.  Progressive lengthening of 3' untranslated regions of mRNAs by alternative polyadenylation during mouse embryonic development.

Authors:  Zhe Ji; Ju Youn Lee; Zhenhua Pan; Bingjun Jiang; Bin Tian
Journal:  Proc Natl Acad Sci U S A       Date:  2009-04-16       Impact factor: 11.205

9.  A novel FADS1 isoform potentiates FADS2-mediated production of eicosanoid precursor fatty acids.

Authors:  Woo Jung Park; Kumar S D Kothapalli; Holly T Reardon; Peter Lawrence; Shu-Bing Qian; J Thomas Brenna
Journal:  J Lipid Res       Date:  2012-05-22       Impact factor: 5.922

Review 10.  RNA processing and its regulation: global insights into biological networks.

Authors:  Donny D Licatalosi; Robert B Darnell
Journal:  Nat Rev Genet       Date:  2010-01       Impact factor: 53.242

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