Literature DB >> 18815904

Purification and characterization of a glycoside hydrolase family 43 beta-xylosidase from Geobacillus thermoleovorans IT-08.

Kurt Wagschal1, Chamroeun Heng, Charles C Lee, George H Robertson, William J Orts, Dominic W S Wong.   

Abstract

The gene encoding a glycoside hydrolase family 43 beta-xylosidase (GbtXyl43A) from the thermophilic bacterium Geobacillus thermoleovorans strain IT-08 was synthesized and cloned with a C-terminal His-tag into a pET29b expression vector. The recombinant gene product termed GbtXyl43A was expressed in Escherichia coli and purified to apparent homogeneity. Michaelis-Menten kinetic parameters were obtained for the artificial substrates p-nitrophenyl-beta-D: -xylopyranose (4NPX) and p-nitrophenyl-alpha-L: -arabinofuranose (4NPA), and it was found that the ratio k (cat)/K (m) 4NPA/k (cat)/K (m) 4NPX was approximately 7, indicting greater catalytic efficiency for 4NP hydrolysis from the arabinofuranose aglycon moiety. Substrate inhibition was observed for the substrates 4-methylumbelliferyl xylopyranoside (muX) and the arabinofuranoside cogener (muA), and the ratio k (cat)/K (m) muA/k (cat)/K (m) muX was approximately 5. The enzyme was competitively inhibited by monosaccharides, with an arabinose K (i) of 6.8 +/- 0.62 mM and xylose K (i) of 76 +/- 8.5 mM. The pH maxima was 5.0, and the enzyme was not thermally stable above 54 degrees C, with a t (1/2) of 35 min at 57.5 degrees C. GbtXyl43A showed a broad substrate specificity for hydrolysis of xylooligosaccharides up to the highest degree of polymerization tested (xylopentaose), and also released xylose from birch and beechwood arabinoxylan.

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Year:  2008        PMID: 18815904     DOI: 10.1007/s12010-008-8362-5

Source DB:  PubMed          Journal:  Appl Biochem Biotechnol        ISSN: 0273-2289            Impact factor:   2.926


  12 in total

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2.  Novel pH-Stable Glycoside Hydrolase Family 3 β-Xylosidase from Talaromyces amestolkiae: an Enzyme Displaying Regioselective Transxylosylation.

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Journal:  Appl Environ Microbiol       Date:  2015-07-06       Impact factor: 4.792

3.  Biochemical and kinetic characterization of GH43 β-D-xylosidase/α-L-arabinofuranosidase and GH30 α-L-arabinofuranosidase/β-D -xylosidase from rumen metagenome.

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Authors:  Panagiota M Stathopoulou; Anastasia P Galanopoulou; George E Anasontzis; Amalia D Karagouni; Dimitris G Hatzinikolaou
Journal:  World J Microbiol Biotechnol       Date:  2012-06-20       Impact factor: 3.312

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Authors:  Csaba Attila Fekete; László Kiss
Journal:  Protein J       Date:  2012-12       Impact factor: 2.371

6.  Engineering lower inhibitor affinities in β-D-xylosidase of Selenomonas ruminantium by site-directed mutagenesis of Trp145.

Authors:  Douglas B Jordan; Kurt Wagschal; Zhanmin Fan; Ling Yuan; Jay D Braker; Chamroeun Heng
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7.  Distinct actions by Paenibacillus sp. strain E18 α-L-arabinofuranosidases and xylanase in xylan degradation.

Authors:  Pengjun Shi; Xiaoyan Chen; Kun Meng; Huoqing Huang; Yingguo Bai; Huiying Luo; Peilong Yang; Bin Yao
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8.  Highly thermostable GH39 β-xylosidase from a Geobacillus sp. strain WSUCF1.

Authors:  Aditya Bhalla; Kenneth M Bischoff; Rajesh K Sani
Journal:  BMC Biotechnol       Date:  2014-12-23       Impact factor: 2.563

9.  Biochemical and kinetic characterisation of a novel xylooligosaccharide-upregulated GH43 β-d-xylosidase/α-l-arabinofuranosidase (BXA43) from the probiotic Bifidobacterium animalis subsp. lactis BB-12.

Authors:  Alexander Holm Viborg; Kim Ib Sørensen; Ofir Gilad; Daniel Bisgaard Steen-Jensen; Adiphol Dilokpimol; Susanne Jacobsen; Birte Svensson
Journal:  AMB Express       Date:  2013-09-11       Impact factor: 3.298

10.  Structural basis of product inhibition by arabinose and xylose of the thermostable GH43 β-1,4-xylosidase from Geobacillus thermoleovorans IT-08.

Authors:  Ali Rohman; Niels van Oosterwijk; Ni Nyoman Tri Puspaningsih; Bauke W Dijkstra
Journal:  PLoS One       Date:  2018-04-26       Impact factor: 3.240

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