Literature DB >> 18810654

A GAL4/UAS luciferase system to identify the miRNAs target mRNAs in Drosophila S2 cells.

Wenwen Lv1, Jie Ding, Jiangbo Hu, Chao Wang, Leyi Xu, Ming Fang, Liudi Yuan.   

Abstract

MicroRNAs (miRNAs) have been shown to regulate gene expression through the sequence-specific base pairing with their target mRNAs. However, our understanding of the biological roles of miRNAs is still quite limited, and only a handful of miRNAs have been assigned by genetic analysis in part owing to the difficulty in the identification of their targets. Although computational methods have shown to be helpful in the prediction of miRNA targets, a major obstacle has been the lack of quick and efficient experimental procedures to verify these targets. In this report, we describe a UAS/GAL4-based reporter system for this purpose. Our data indicate it an assay of miRNA-target gene interaction, with greater sensitivity over the previously reported methods, and may be useful for more efficient identification/validation the miRNA targets in Drosophila cell lines.

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Year:  2008        PMID: 18810654     DOI: 10.1007/s11033-008-9360-y

Source DB:  PubMed          Journal:  Mol Biol Rep        ISSN: 0301-4851            Impact factor:   2.316


  24 in total

1.  A microRNA controlling left/right neuronal asymmetry in Caenorhabditis elegans.

Authors:  Robert J Johnston; Oliver Hobert
Journal:  Nature       Date:  2003-12-14       Impact factor: 49.962

2.  Prediction of plant microRNA targets.

Authors:  Matthew W Rhoades; Brenda J Reinhart; Lee P Lim; Christopher B Burge; Bonnie Bartel; David P Bartel
Journal:  Cell       Date:  2002-08-23       Impact factor: 41.582

3.  MicroRNAs act sequentially and asymmetrically to control chemosensory laterality in the nematode.

Authors:  Sarah Chang; Robert J Johnston; Christian Frøkjaer-Jensen; Shawn Lockery; Oliver Hobert
Journal:  Nature       Date:  2004-08-12       Impact factor: 49.962

4.  The 21-nucleotide let-7 RNA regulates developmental timing in Caenorhabditis elegans.

Authors:  B J Reinhart; F J Slack; M Basson; A E Pasquinelli; J C Bettinger; A E Rougvie; H R Horvitz; G Ruvkun
Journal:  Nature       Date:  2000-02-24       Impact factor: 49.962

5.  Sizing up miRNAs as cancer genes.

Authors:  Carlos Caldas; James D Brenton
Journal:  Nat Med       Date:  2005-07       Impact factor: 53.440

6.  The cold shock domain protein LIN-28 controls developmental timing in C. elegans and is regulated by the lin-4 RNA.

Authors:  E G Moss; R C Lee; V Ambros
Journal:  Cell       Date:  1997-03-07       Impact factor: 41.582

7.  The microRNA miR-124 antagonizes the anti-neural REST/SCP1 pathway during embryonic CNS development.

Authors:  Jaya Visvanathan; Seunghee Lee; Bora Lee; Jae W Lee; Soo-Kyung Lee
Journal:  Genes Dev       Date:  2007-04-01       Impact factor: 11.361

8.  A pancreatic islet-specific microRNA regulates insulin secretion.

Authors:  Matthew N Poy; Lena Eliasson; Jan Krutzfeldt; Satoru Kuwajima; Xiaosong Ma; Patrick E Macdonald; Sébastien Pfeffer; Thomas Tuschl; Nikolaus Rajewsky; Patrik Rorsman; Markus Stoffel
Journal:  Nature       Date:  2004-11-11       Impact factor: 49.962

9.  The Caenorhabditis elegans hunchback-like gene lin-57/hbl-1 controls developmental time and is regulated by microRNAs.

Authors:  Juan E Abrahante; Aric L Daul; Ming Li; Mandy L Volk; Jason M Tennessen; Eric A Miller; Ann E Rougvie
Journal:  Dev Cell       Date:  2003-05       Impact factor: 12.270

10.  MicroRNAs modulate hematopoietic lineage differentiation.

Authors:  Chang-Zheng Chen; Ling Li; Harvey F Lodish; David P Bartel
Journal:  Science       Date:  2003-12-04       Impact factor: 47.728

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