Literature DB >> 18809197

Alanine-dependent reactions of 5'-deoxypyridoxal in water.

Maybelle K Go1, John P Richard.   

Abstract

The non-enzymatic reaction of 5'-deoxypyridoxal (DPL) with l-alanine in water at 25 degrees C was investigated. DPL reacts with alanine to form an imine, which then undergoes deprotonation at the alpha-amino carbon of alanine to form a resonance delocalized DPL-stabilized carbanion. At early reaction times the only detectable products are pyruvate and the dimeric species formed by addition of the alpha-pyridine stabilized carbanion to DPL. No Claisen-type products of addition of the alpha-amino carbanion to DPL, as was previously reported to form from the reaction between DPL and glycine [K. Toth, T.L. Amyes, J.P. Richard, J.P.G. Malthouse, M.E. Ni Beilliu, J. Am. Chem. Soc. 126 (2004) 10538-10539], are observed. The electrophile reacts instead at the alpha-pyridyl carbon. This dimer is in chemical equilibrium with reactants. At longer reaction times about 50% of DPL is converted to 5'-deoxypyridoxamine, the thermodynamically favored product of formal transamination of DPL.

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Year:  2008        PMID: 18809197      PMCID: PMC2603163          DOI: 10.1016/j.bioorg.2008.08.003

Source DB:  PubMed          Journal:  Bioorg Chem        ISSN: 0045-2068            Impact factor:   5.275


  9 in total

1.  Glycine enolates: the large effect of iminium ion formation on alpha-amino carbon acidity.

Authors:  A Rios; J Crugeiras; T L Amyes; J P Richard
Journal:  J Am Chem Soc       Date:  2001-08-15       Impact factor: 15.419

2.  Claisen-type addition of glycine to pyridoxal in water.

Authors:  Krisztina Toth; Tina L Amyes; John P Richard; J Paul G Malthouse; Máire E NíBeilliú
Journal:  J Am Chem Soc       Date:  2004-09-01       Impact factor: 15.419

3.  Claisen-type addition of glycine to a pyridoxal iminium ion in water.

Authors:  Krisztina Toth; Lauren M Gaskell; John P Richard
Journal:  J Org Chem       Date:  2006-09-01       Impact factor: 4.354

4.  Aminomalonic acid. Spontaneous decarboxylation and reaction with 5-deoxypyridoxal.

Authors:  J W Thanassi
Journal:  Biochemistry       Date:  1970-02-03       Impact factor: 3.162

Review 5.  Reaction pathways and mechanisms of pyridoxal catalysis.

Authors:  A E Martell
Journal:  Adv Enzymol Relat Areas Mol Biol       Date:  1982

Review 6.  Reaction specificity in pyridoxal phosphate enzymes.

Authors:  Michael D Toney
Journal:  Arch Biochem Biophys       Date:  2005-01-01       Impact factor: 4.013

7.  Covalent catalysis by pyridoxal: evaluation of the effect of the cofactor on the carbon acidity of glycine.

Authors:  Krisztina Toth; John P Richard
Journal:  J Am Chem Soc       Date:  2007-02-14       Impact factor: 15.419

8.  A combined quantum mechanical and molecular mechanical study of the reaction mechanism and alpha-amino acidity in alanine racemase.

Authors:  Dan Thomas Major; Jiali Gao
Journal:  J Am Chem Soc       Date:  2006-12-20       Impact factor: 15.419

9.  Alanine racemase free energy profiles from global analyses of progress curves.

Authors:  M Ashley Spies; Joshua J Woodward; Mitchell R Watnik; Michael D Toney
Journal:  J Am Chem Soc       Date:  2004-06-23       Impact factor: 15.419

  9 in total
  4 in total

Review 1.  The PLP cofactor: lessons from studies on model reactions.

Authors:  John P Richard; Tina L Amyes; Juan Crugeiras; Ana Rios
Journal:  Biochim Biophys Acta       Date:  2010-12-20

Review 2.  Controlling reaction specificity in pyridoxal phosphate enzymes.

Authors:  Michael D Toney
Journal:  Biochim Biophys Acta       Date:  2011-06-06

Review 3.  Pyridoxal 5'-phosphate: electrophilic catalyst extraordinaire.

Authors:  John P Richard; Tina L Amyes; Juan Crugeiras; Ana Rios
Journal:  Curr Opin Chem Biol       Date:  2009-07-27       Impact factor: 8.822

4.  Substituent Effects on Carbon Acidity in Aqueous Solution and at Enzyme Active Sites.

Authors:  Tina L Amyes; John P Richard
Journal:  Synlett       Date:  2017-03-10       Impact factor: 2.454

  4 in total

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