Literature DB >> 18800528

Impact of bioavailability restrictions on microbially induced stable isotope fractionation. 1. Theoretical calculation.

Martin Thullner1, Makeba Kampara, Hans H Richnow, Hauke Harms, Lukas Y Wick.   

Abstract

The microbial degradation of organic substrates often exhibits a fractionation of stable isotopes which leads to an enrichment of the heavier isotope in the remaining substrate. The use of this effect to quantify the amount of biodegraded substrate in contaminated aquifers requires that the isotope fractionation factor is constant in time and space. In many natural and engineered systems the bioavailable concentration at the location of the enzymes differs from the average bulk concentration of the substrate. When enzymatically driven substrate degradation is coupled to a preceding transport step controlling the bioavailability of the substrate, the observed isotope fractionation becomes a function of the bulk substrate concentration. The sensitivity of the observed isotope fractionation factor toward such substrate concentration changes depends on the ratio of bulk substrate concentration and Michaelis-Menten constant and on the ratio between the specific affinity of the microorganisms toward the substrate and the first order rate constant of the bioavailability limiting transport process. Highest sensitivities toward substrate concentration were found for combinations of high substrate concentration with low substrate bioavailability (i.e., high ratios of substrate concentration and Michaelis-Menten constant, and high ratios of specific affinity and transport rate constant). As a consequence, changes in concentration and isotopic composition of a bioavailability limited substrate in batch experiments should not exhibit a linear relation in a Rayleigh plot, and the slope of the Rayleigh plot should show a decreasing trend with concentration decrease. When using isotope fractionation to quantify biodegradation along groundwater flow paths, changes in observed isotope fractionation might occur while contaminant concentration decreases along a flow path.

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Year:  2008        PMID: 18800528     DOI: 10.1021/es702782c

Source DB:  PubMed          Journal:  Environ Sci Technol        ISSN: 0013-936X            Impact factor:   9.028


  9 in total

1.  Mass-Transfer-Limited Biodegradation at Low Concentrations-Evidence from Reactive Transport Modeling of Isotope Profiles in a Bench-Scale Aquifer.

Authors:  Fengchao Sun; Adrian Mellage; Mehdi Gharasoo; Aileen Melsbach; Xin Cao; Ralf Zimmermann; Christian Griebler; Martin Thullner; Olaf A Cirpka; Martin Elsner
Journal:  Environ Sci Technol       Date:  2021-05-10       Impact factor: 9.028

2.  Multiple sulfur isotope signatures of sulfite and thiosulfate reduction by the model dissimilatory sulfate-reducer, Desulfovibrio alaskensis str. G20.

Authors:  William D Leavitt; Renata Cummins; Marian L Schmidt; Min S Sim; Shuhei Ono; Alexander S Bradley; David T Johnston
Journal:  Front Microbiol       Date:  2014-11-25       Impact factor: 5.640

3.  Introduction of a new platform for parameter estimation of kinetically complex environmental systems.

Authors:  Mehdi Gharasoo; Martin Thullner; Martin Elsner
Journal:  Environ Model Softw       Date:  2017-12       Impact factor: 5.288

4.  Rate-Limiting Mass Transfer in Micropollutant Degradation Revealed by Isotope Fractionation in Chemostat.

Authors:  Benno N Ehrl; Kankana Kundu; Mehdi Gharasoo; Sviatlana Marozava; Martin Elsner
Journal:  Environ Sci Technol       Date:  2018-12-19       Impact factor: 9.028

5.  Isotope Fractionation Pinpoints Membrane Permeability as a Barrier to Atrazine Biodegradation in Gram-negative Polaromonas sp. Nea-C.

Authors:  Benno N Ehrl; Mehdi Gharasoo; Martin Elsner
Journal:  Environ Sci Technol       Date:  2018-03-23       Impact factor: 9.028

6.  Defining lower limits of biodegradation: atrazine degradation regulated by mass transfer and maintenance demand in Arthrobacter aurescens TC1.

Authors:  Kankana Kundu; Sviatlana Marozava; Benno Ehrl; Juliane Merl-Pham; Christian Griebler; Martin Elsner
Journal:  ISME J       Date:  2019-05-09       Impact factor: 10.302

7.  Linking Increased Isotope Fractionation at Low Concentrations to Enzyme Activity Regulation: 4-Cl Phenol Degradation by Arthrobacter chlorophenolicus A6.

Authors:  Kankana Kundu; Aileen Melsbach; Benjamin Heckel; Sarah Schneidemann; Dheeraj Kanapathi; Sviatlana Marozava; Juliane Merl-Pham; Martin Elsner
Journal:  Environ Sci Technol       Date:  2022-02-11       Impact factor: 9.028

8.  Toward Improved Bioremediation Strategies: Response of BAM-Degradation Activity to Concentration and Flow Changes in an Inoculated Bench-Scale Sediment Tank.

Authors:  Fengchao Sun; Adrian Mellage; Zhe Wang; Rani Bakkour; Christian Griebler; Martin Thullner; Olaf A Cirpka; Martin Elsner
Journal:  Environ Sci Technol       Date:  2022-03-09       Impact factor: 9.028

9.  Modeling of Contaminant Biodegradation and Compound-Specific Isotope Fractionation in Chemostats at Low Dilution Rates.

Authors:  Mehdi Gharasoo; Benno N Ehrl; Olaf A Cirpka; Martin Elsner
Journal:  Environ Sci Technol       Date:  2019-01-07       Impact factor: 9.028

  9 in total

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