Literature DB >> 18799322

Inverse hydrogen migration in arginine-containing peptide ions upon electron transfer.

Subhasis Panja1, Steen Brøndsted Nielsen, Preben Hvelplund, Frantisek Turecek.   

Abstract

Collisional electron transfer from gaseous Cs atoms was studied for singly and doubly protonated peptides Gly-Arg (GR) and Ala-Arg (AR) at 50- and 100-keV kinetic energies. Singly protonated GR and AR were discharged to radicals that in part rearranged by migration of a C(alpha) hydrogen atom onto the guanidine group. The C(alpha)-radical isomers formed were detected as stable anions following transfer of a second electron. In addition to the stabilizing rearrangements, the radicals underwent side-chain and backbone dissociations. The latter formed z fragments that were detected as the corresponding anions. Analysis of the (GR + H)(.) radical potential energy surface using electronic structure theory in combination with Rice-Ramsperger-Kassel-Marcus calculations of rate constants indicated that the arginine C(alpha) hydrogen atom was likely to be transferred to the arginine side-chain on the experimental timescale of <or=200 ns. Transfer of the Gly C(alpha)H was calculated to have a higher transition-state energy and was not kinetically competitive. Collisional electron transfer to doubly protonated GR and AR resulted in complete dissociation of (GR + 2H)(+.) and (AR + 2H)(+.) ions by loss of H, ammonia, and NC(alpha) bond cleavage. Electronic structure theory analysis of (GR + 2H)(+.) indicated the presence of multiple conformers and electronic states that differed in reactivity and steered the dissociations to distinct channels. Electron attachment to (GR + 2H)(2+) resulted in the formation of closely spaced electronic states of (GR + 2H)(+.) in which the electron density was delocalized over the guanidinium, ammonium, amide, and carboxyl groups. The different behavior of (GR + H)(.) and (GR + 2H)(+.) is explained by the different timescales for dissociation and different internal energies acquired upon electron transfer.

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Year:  2008        PMID: 18799322     DOI: 10.1016/j.jasms.2008.08.001

Source DB:  PubMed          Journal:  J Am Soc Mass Spectrom        ISSN: 1044-0305            Impact factor:   3.109


  23 in total

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3.  The arginine anomaly: arginine radicals are poor hydrogen atom donors in electron transfer induced dissociations.

Authors:  Xiaohong Chen; Frantisek Turecek
Journal:  J Am Chem Soc       Date:  2006-09-27       Impact factor: 15.419

4.  Experimental and theoretical investigations of the loss of amino acid side chains in electron capture dissociation of model peptides.

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Journal:  J Am Soc Mass Spectrom       Date:  2005-09       Impact factor: 3.109

5.  Are the enolates of amides and esters stabilized by electrostatics?

Authors:  Paul R Rablen; Keith H Bentrup
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6.  N[bond]C(alpha) bond dissociation energies and kinetics in amide and peptide radicals. Is the dissociation a non-ergodic process?

Authors:  Frantisek Turecek
Journal:  J Am Chem Soc       Date:  2003-05-14       Impact factor: 15.419

7.  On the mechanism of electron-capture-induced dissociation of peptide dications from 15n-labeling and crown-ether complexation.

Authors:  Anne I S Holm; Preben Hvelplund; Umesh Kadhane; Mikkel Koefoed Larsen; Bo Liu; Steen Brøndsted Nielsen; Subhasis Panja; Jan Mondrup Pedersen; Troels Skrydstrup; Kristian Støchkel; Evan R Williams; Esben S Worm
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8.  Electron super-rich radicals in the gas phase. A neutralization-reionization mass spectrometric and ab initio/RRKM study of diaminohydroxymethyl and triaminomethyl radicals.

Authors:  Changtong Hao; Jennifer L Seymour; Frantisek Turecek
Journal:  J Phys Chem A       Date:  2007-08-17       Impact factor: 2.781

9.  Are the radical centers in peptide radical cations mobile? The generation, tautomerism, and dissociation of isomeric alpha-carbon-centered triglycine radical cations in the gas phase.

Authors:  Ivan K Chu; Junfang Zhao; Minjie Xu; Shiu On Siu; Alan C Hopkinson; K W Michael Siu
Journal:  J Am Chem Soc       Date:  2008-05-31       Impact factor: 15.419

10.  Mechanism and energetics of intramolecular hydrogen transfer in amide and peptide radicals and cation-radicals.

Authors:  Frantisek Turecek; Erik A Syrstad
Journal:  J Am Chem Soc       Date:  2003-03-19       Impact factor: 15.419

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  8 in total

1.  Cascade dissociations of peptide cation-radicals. Part 1. Scope and effects of amino acid residues in penta-, nona-, and decapeptides.

Authors:  Thomas W Chung; Renjie Hui; Aaron Ledvina; Joshua J Coon; Frantisek Tureček
Journal:  J Am Soc Mass Spectrom       Date:  2012-06-06       Impact factor: 3.109

2.  Tunable charge tags for electron-based methods of peptide sequencing: design and applications.

Authors:  Magdalena Zimnicka; Christopher L Moss; Thomas W Chung; Renjie Hui; František Tureček
Journal:  J Am Soc Mass Spectrom       Date:  2011-06-23       Impact factor: 3.109

3.  Renaissance of cation-radicals in mass spectrometry.

Authors:  František Tureček
Journal:  Mass Spectrom (Tokyo)       Date:  2013-04-15

4.  The early life of a peptide cation-radical. Ground and excited-state trajectories of electron-based peptide dissociations during the first 330 femtoseconds.

Authors:  Christopher L Moss; Wenkel Liang; Xiaosong Li; František Tureček
Journal:  J Am Soc Mass Spectrom       Date:  2011-12-21       Impact factor: 3.109

5.  Electron-capture and -transfer dissociation of peptides tagged with tunable fixed-charge groups: structures and dissociation energetics.

Authors:  Thomas W Chung; Christopher L Moss; Magdalena Zimnicka; Richard S Johnson; Robert L Moritz; František Tureček
Journal:  J Am Soc Mass Spectrom       Date:  2011-01-20       Impact factor: 3.109

6.  Unusual fragmentation of β-linked peptides by ExD tandem mass spectrometry.

Authors:  Nadezda P Sargaeva; Cheng Lin; Peter B O'Connor
Journal:  J Am Soc Mass Spectrom       Date:  2011-01-29       Impact factor: 3.109

7.  Dipole-guided electron capture causes abnormal dissociations of phosphorylated pentapeptides.

Authors:  Christopher L Moss; Thomas W Chung; Jean A Wyer; Steen Brøndsted Nielsen; Preben Hvelplund; František Tureček
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8.  Analysis of arginine and lysine methylation utilizing peptide separations at neutral pH and electron transfer dissociation mass spectrometry.

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  8 in total

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