Literature DB >> 18798549

Conservation of notochord gene expression across chordates: insights from the Leprecan gene family.

Terence D Capellini1, Matthew P Dunn, Yale J Passamaneck, Licia Selleri, Anna Di Gregorio.   

Abstract

The notochord is a defining character of the chordates, and the T-box transcription factor Brachyury has been shown to be required for notochord development in all chordates examined. In the ascidian Ciona intestinalis, at least 44 notochord genes have been identified as bona fide transcriptional targets of Brachyury. We examined the embryonic expression of a subset of murine orthologs of Ciona Brachyury target genes in the notochord to assess its conservation throughout chordate evolution. We focused on analyzing the Leprecan gene family, which in mouse is composed of three genes, as opposed to the single-copy Ciona gene. We found that all three mouse Leprecan genes are expressed in the notochord. Additionally, while Leprecan expression in C. intestinalis is confined to the notochord, expression of its mouse orthologs includes dorsal root ganglia, limb buds, branchial arches, and developing kidneys. These results have interesting implications for the evolution and development of chordates. Copyright 2008 Wiley-Liss, Inc.

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Year:  2008        PMID: 18798549      PMCID: PMC3065379          DOI: 10.1002/dvg.20406

Source DB:  PubMed          Journal:  Genesis        ISSN: 1526-954X            Impact factor:   2.487


  57 in total

1.  Brachyury downstream notochord differentiation in the ascidian embryo.

Authors:  H Takahashi; K Hotta; A Erives; A Di Gregorio; R W Zeller; M Levine; N Satoh
Journal:  Genes Dev       Date:  1999-06-15       Impact factor: 11.361

2.  Molecular characterization of a novel basement membrane-associated proteoglycan, leprecan.

Authors:  D J Wassenhove-McCarthy; K J McCarthy
Journal:  J Biol Chem       Date:  1999-08-27       Impact factor: 5.157

3.  MODELTEST: testing the model of DNA substitution.

Authors:  D Posada; K A Crandall
Journal:  Bioinformatics       Date:  1998       Impact factor: 6.937

4.  Type IV collagen in sponges, the missing link in basement membrane ubiquity.

Authors:  N Boute; J Y Exposito; N Boury-Esnault; J Vacelet; N Noro; K Miyazaki; K Yoshizato; R Garrone
Journal:  Biol Cell       Date:  1996       Impact factor: 4.458

5.  Expression pattern of the mouse T gene and its role in mesoderm formation.

Authors:  D G Wilkinson; S Bhatt; B G Herrmann
Journal:  Nature       Date:  1990-02-15       Impact factor: 49.962

6.  The mouse homeobox gene Not is required for caudal notochord development and affected by the truncate mutation.

Authors:  Hanaa Ben Abdelkhalek; Anja Beckers; Karin Schuster-Gossler; Maria N Pavlova; Hannelore Burkhardt; Heiko Lickert; Janet Rossant; Richard Reinhardt; Leonard C Schalkwyk; Ines Müller; Bernhard G Herrmann; Marcelo Ceolin; Rolando Rivera-Pomar; Achim Gossler
Journal:  Genes Dev       Date:  2004-07-01       Impact factor: 11.361

7.  Prolyl 3-hydroxylase 1, enzyme characterization and identification of a novel family of enzymes.

Authors:  Janice A Vranka; Lynn Y Sakai; Hans Peter Bächinger
Journal:  J Biol Chem       Date:  2004-03-24       Impact factor: 5.157

8.  Bix4 is activated directly by VegT and mediates endoderm formation in Xenopus development.

Authors:  E S Casey; M Tada; L Fairclough; C C Wylie; J Heasman; J C Smith
Journal:  Development       Date:  1999-10       Impact factor: 6.868

9.  Bix1, a direct target of Xenopus T-box genes, causes formation of ventral mesoderm and endoderm.

Authors:  M Tada; E S Casey; L Fairclough; J C Smith
Journal:  Development       Date:  1998-10       Impact factor: 6.868

10.  The T-box transcription factor Brachyury regulates expression of eFGF through binding to a non-palindromic response element.

Authors:  E S Casey; M A O'Reilly; F L Conlon; J C Smith
Journal:  Development       Date:  1998-10       Impact factor: 6.868

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  15 in total

1.  A role for prolyl 3-hydroxylase 2 in post-translational modification of fibril-forming collagens.

Authors:  Russell J Fernandes; Alex W Farnand; Geoffrey R Traeger; Mary Ann Weis; David R Eyre
Journal:  J Biol Chem       Date:  2011-07-11       Impact factor: 5.157

2.  The FGFR/MEK/ERK/brachyury pathway is critical for chordoma cell growth and survival.

Authors:  Yunping Hu; Akiva Mintz; Sagar R Shah; Alfredo Quinones-Hinojosa; Wesley Hsu
Journal:  Carcinogenesis       Date:  2014-01-20       Impact factor: 4.944

3.  Post-translational modification of type IV collagen with 3-hydroxyproline affects its interactions with glycoprotein VI and nidogens 1 and 2.

Authors:  Nathan T Montgomery; Keith D Zientek; Elena N Pokidysheva; Hans Peter Bächinger
Journal:  J Biol Chem       Date:  2018-02-28       Impact factor: 5.157

4.  Targeted mutagenesis of zebrafish antithrombin III triggers disseminated intravascular coagulation and thrombosis, revealing insight into function.

Authors:  Yang Liu; Colin A Kretz; Morgan L Maeder; Catherine E Richter; Philip Tsao; Andy H Vo; Michael C Huarng; Thomas Rode; Zhilian Hu; Rohit Mehra; Steven T Olson; J Keith Joung; Jordan A Shavit
Journal:  Blood       Date:  2014-04-29       Impact factor: 22.113

5.  The evolutionarily conserved leprecan gene: its regulation by Brachyury and its role in the developing Ciona notochord.

Authors:  Matthew P Dunn; Anna Di Gregorio
Journal:  Dev Biol       Date:  2009-02-13       Impact factor: 3.582

6.  Location of 3-hydroxyproline residues in collagen types I, II, III, and V/XI implies a role in fibril supramolecular assembly.

Authors:  Mary Ann Weis; David M Hudson; Lammy Kim; Melissa Scott; Jiann-Jiu Wu; David R Eyre
Journal:  J Biol Chem       Date:  2009-11-23       Impact factor: 5.157

Review 7.  Collagen prolyl 3-hydroxylation: a major role for a minor post-translational modification?

Authors:  David M Hudson; David R Eyre
Journal:  Connect Tissue Res       Date:  2013-06-21       Impact factor: 3.417

Review 8.  On a possible evolutionary link of the stomochord of hemichordates to pharyngeal organs of chordates.

Authors:  Noriyuki Satoh; Kunifumi Tagawa; Christopher J Lowe; Jr-Kai Yu; Takeshi Kawashima; Hiroki Takahashi; Michio Ogasawara; Marc Kirschner; Kanako Hisata; Yi-Hsien Su; John Gerhart
Journal:  Genesis       Date:  2014-11-04       Impact factor: 2.487

9.  Evolutionary changes in the notochord genetic toolkit: a comparative analysis of notochord genes in the ascidian Ciona and the larvacean Oikopleura.

Authors:  Jamie E Kugler; Pierre Kerner; Jean-Marie Bouquet; Di Jiang; Anna Di Gregorio
Journal:  BMC Evol Biol       Date:  2011-01-20       Impact factor: 3.260

10.  Insights on the evolution of prolyl 3-hydroxylation sites from comparative analysis of chicken and Xenopus fibrillar collagens.

Authors:  David M Hudson; Maryann Weis; David R Eyre
Journal:  PLoS One       Date:  2011-05-03       Impact factor: 3.240

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