Literature DB >> 18795886

A ligand-based approach to mining the chemogenomic space of drugs.

Elisabet Gregori-Puigjané1, Jordi Mestres.   

Abstract

The practical implementation and validation of a ligand-based approach to mining the chemogenomic space of drugs is presented and applied to the in silico target profiling of 767 drugs against 684 targets of therapeutic relevance. The results reveal that drugs targeting aminergic G protein-coupled receptors (GPCRs) show the most promiscuous pharmacological profiles. The detection of cross-pharmacologies between aminergic GPCRs and the opioid, sigma, NMDA, and 5-HT3 receptors aggravate the potential promiscuity of those drugs, predominantly including analgesics, antidepressants, and antipsychotics.

Entities:  

Mesh:

Substances:

Year:  2008        PMID: 18795886     DOI: 10.2174/138620708785739952

Source DB:  PubMed          Journal:  Comb Chem High Throughput Screen        ISSN: 1386-2073            Impact factor:   1.339


  22 in total

1.  Identifying mechanism-of-action targets for drugs and probes.

Authors:  Elisabet Gregori-Puigjané; Vincent Setola; Jérôme Hert; Brenda A Crews; John J Irwin; Eugen Lounkine; Lawrence Marnett; Bryan L Roth; Brian K Shoichet
Journal:  Proc Natl Acad Sci U S A       Date:  2012-06-18       Impact factor: 11.205

Review 2.  Insights into Computational Drug Repurposing for Neurodegenerative Disease.

Authors:  Manish D Paranjpe; Alice Taubes; Marina Sirota
Journal:  Trends Pharmacol Sci       Date:  2019-07-17       Impact factor: 14.819

3.  Cross-pharmacology analysis of G protein-coupled receptors.

Authors:  Ferran Briansó; Maria C Carrascosa; Tudor I Oprea; Jordi Mestres
Journal:  Curr Top Med Chem       Date:  2011       Impact factor: 3.295

Review 4.  Providing data science support for systems pharmacology and its implications to drug discovery.

Authors:  Thomas Hart; Lei Xie
Journal:  Expert Opin Drug Discov       Date:  2016-01-09       Impact factor: 6.098

5.  The Mycobacterium tuberculosis drugome and its polypharmacological implications.

Authors:  Sarah L Kinnings; Li Xie; Kingston H Fung; Richard M Jackson; Lei Xie; Philip E Bourne
Journal:  PLoS Comput Biol       Date:  2010-11-04       Impact factor: 4.475

6.  Computationally guided high-throughput design of self-assembling drug nanoparticles.

Authors:  Daniel Reker; Yulia Rybakova; Ameya R Kirtane; Ruonan Cao; Jee Won Yang; Natsuda Navamajiti; Apolonia Gardner; Rosanna M Zhang; Tina Esfandiary; Johanna L'Heureux; Thomas von Erlach; Elena M Smekalova; Dominique Leboeuf; Kaitlyn Hess; Aaron Lopes; Jaimie Rogner; Joy Collins; Siddartha M Tamang; Keiko Ishida; Paul Chamberlain; DongSoo Yun; Abigail Lytton-Jean; Christian K Soule; Jaime H Cheah; Alison M Hayward; Robert Langer; Giovanni Traverso
Journal:  Nat Nanotechnol       Date:  2021-03-25       Impact factor: 40.523

7.  Crucial involvement of actin filaments in celecoxib and morphine analgesia in a model of inflammatory pain.

Authors:  Patrícia Paiva-Lima; Rafael M Rezende; Rômulo Leite; Igor Dg Duarte; Ys Bakhle; Janetti N Francischi
Journal:  J Pain Res       Date:  2012-11-09       Impact factor: 3.133

8.  Fragment library screening reveals remarkable similarities between the G protein-coupled receptor histamine H₄ and the ion channel serotonin 5-HT₃A.

Authors:  Mark H P Verheij; Chris de Graaf; Gerdien E de Kloe; Saskia Nijmeijer; Henry F Vischer; Rogier A Smits; Obbe P Zuiderveld; Saskia Hulscher; Linda Silvestri; Andrew J Thompson; Jacqueline E van Muijlwijk-Koezen; Sarah C R Lummis; Rob Leurs; Iwan J P de Esch
Journal:  Bioorg Med Chem Lett       Date:  2011-07-02       Impact factor: 2.823

Review 9.  Turning liabilities into opportunities: Off-target based drug repurposing in cancer.

Authors:  Vinayak Palve; Yi Liao; Lily L Remsing Rix; Uwe Rix
Journal:  Semin Cancer Biol       Date:  2020-02-07       Impact factor: 15.707

10.  2D and 3D similarity landscape analysis identifies PARP as a novel off-target for the drug Vatalanib.

Authors:  Bjoern-Oliver Gohlke; Tim Overkamp; Anja Richter; Antje Richter; Peter T Daniel; Bernd Gillissen; Robert Preissner
Journal:  BMC Bioinformatics       Date:  2015-09-24       Impact factor: 3.169

View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.