Literature DB >> 18794913

Symbiotic conversations are revealed under genetic interrogation.

Edward G Ruby1.   

Abstract

The recent development and application of molecular genetics to the symbionts of invertebrate animal species have advanced our knowledge of the biochemical communication that occurs between the host and its bacterial symbionts. In particular, the ability to manipulate these associations experimentally by introducing genetic variants of the symbionts into naive hosts has allowed the discovery of novel colonization mechanisms and factors. In addition, the role of the symbionts in inducing normal host development has been revealed, and its molecular basis described. In this Review, I discuss many of these developments, focusing on what has been discovered in five well-understood model systems.

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Year:  2008        PMID: 18794913      PMCID: PMC3579588          DOI: 10.1038/nrmicro1958

Source DB:  PubMed          Journal:  Nat Rev Microbiol        ISSN: 1740-1526            Impact factor:   60.633


  111 in total

1.  RP4-based plasmids for conjugation between Escherichia coli and members of the Vibrionaceae.

Authors:  Eric V Stabb; Edward G Ruby
Journal:  Methods Enzymol       Date:  2002       Impact factor: 1.600

Review 2.  The acetate switch.

Authors:  Alan J Wolfe
Journal:  Microbiol Mol Biol Rev       Date:  2005-03       Impact factor: 11.056

3.  Massive genome erosion and functional adaptations provide insights into the symbiotic lifestyle of Sodalis glossinidius in the tsetse host.

Authors:  Hidehiro Toh; Brian L Weiss; Sarah A H Perkin; Atsushi Yamashita; Kenshiro Oshima; Masahira Hattori; Serap Aksoy
Journal:  Genome Res       Date:  2005-12-19       Impact factor: 9.043

Review 4.  Arbuscular mycorrhiza: the mother of plant root endosymbioses.

Authors:  Martin Parniske
Journal:  Nat Rev Microbiol       Date:  2008-10       Impact factor: 60.633

5.  A humanized gnotobiotic mouse model of host-archaeal-bacterial mutualism.

Authors:  Buck S Samuel; Jeffrey I Gordon
Journal:  Proc Natl Acad Sci U S A       Date:  2006-06-16       Impact factor: 11.205

6.  Interspecific transfer of bacterial endosymbionts between tsetse fly species: infection establishment and effect on host fitness.

Authors:  Brian L Weiss; Rosa Mouchotte; Rita V M Rio; Yi-Neng Wu; Zheyang Wu; Abdelaziz Heddi; Serap Aksoy
Journal:  Appl Environ Microbiol       Date:  2006-09-01       Impact factor: 4.792

7.  Complete genome sequence of Vibrio fischeri: a symbiotic bacterium with pathogenic congeners.

Authors:  E G Ruby; M Urbanowski; J Campbell; A Dunn; M Faini; R Gunsalus; P Lostroh; C Lupp; J McCann; D Millikan; A Schaefer; E Stabb; A Stevens; K Visick; C Whistler; E P Greenberg
Journal:  Proc Natl Acad Sci U S A       Date:  2005-02-09       Impact factor: 11.205

8.  The symbiosis regulator rscS controls the syp gene locus, biofilm formation and symbiotic aggregation by Vibrio fischeri.

Authors:  Emily S Yip; Kati Geszvain; Cindy R DeLoney-Marino; Karen L Visick
Journal:  Mol Microbiol       Date:  2006-12       Impact factor: 3.501

Review 9.  They've got a ticket to ride: Xenorhabdus nematophila-Steinernema carpocapsae symbiosis.

Authors:  Heidi Goodrich-Blair
Journal:  Curr Opin Microbiol       Date:  2007-06-05       Impact factor: 7.934

10.  An annotated cDNA library of juvenile Euprymna scolopes with and without colonization by the symbiont Vibrio fischeri.

Authors:  Carlene K Chun; Todd E Scheetz; Maria de Fatima Bonaldo; Bartley Brown; Anik Clemens; Wendy J Crookes-Goodson; Keith Crouch; Tad DeMartini; Mari Eyestone; Michael S Goodson; Bernadette Janssens; Jennifer L Kimbell; Tanya A Koropatnick; Tamara Kucaba; Christina Smith; Jennifer J Stewart; Deyan Tong; Joshua V Troll; Sarahrose Webster; Jane Winhall-Rice; Cory Yap; Thomas L Casavant; Margaret J McFall-Ngai; M Bento Soares
Journal:  BMC Genomics       Date:  2006-06-16       Impact factor: 3.969

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  62 in total

1.  Shedding light on bioluminescence regulation in Vibrio fischeri.

Authors:  Tim Miyashiro; Edward G Ruby
Journal:  Mol Microbiol       Date:  2012-05-02       Impact factor: 3.501

Review 2.  Engineering ecosystems and synthetic ecologies.

Authors:  Michael T Mee; Harris H Wang
Journal:  Mol Biosyst       Date:  2012-10

Review 3.  Molecular Regulators of Entomopathogenic Nematode-Bacterial Symbiosis.

Authors:  Ioannis Eleftherianos; Christa Heryanto
Journal:  Results Probl Cell Differ       Date:  2020

4.  EcoFABs: advancing microbiome science through standardized fabricated ecosystems.

Authors:  Karsten Zengler; Kirsten Hofmockel; Nitin S Baliga; Scott W Behie; Hans C Bernstein; James B Brown; José R Dinneny; Sheri A Floge; Samuel P Forry; Matthias Hess; Scott A Jackson; Christer Jansson; Stephen R Lindemann; Jennifer Pett-Ridge; Costas Maranas; Ophelia S Venturelli; Matthew D Wallenstein; Elizabeth A Shank; Trent R Northen
Journal:  Nat Methods       Date:  2019-07       Impact factor: 28.547

5.  Global discovery of colonization determinants in the squid symbiont Vibrio fischeri.

Authors:  John F Brooks; Mattias C Gyllborg; David C Cronin; Sarah J Quillin; Celeste A Mallama; Randi Foxall; Cheryl Whistler; Andrew L Goodman; Mark J Mandel
Journal:  Proc Natl Acad Sci U S A       Date:  2014-11-17       Impact factor: 11.205

6.  Rotation of Vibrio fischeri Flagella Produces Outer Membrane Vesicles That Induce Host Development.

Authors:  Marie-Stephanie Aschtgen; Jonathan B Lynch; Eric Koch; Julia Schwartzman; Margaret McFall-Ngai; Edward Ruby
Journal:  J Bacteriol       Date:  2016-07-28       Impact factor: 3.490

7.  Purine biosynthesis, biofilm formation, and persistence of an insect-microbe gut symbiosis.

Authors:  Jiyeun Kate Kim; Jeong Yun Kwon; Soo Kyoung Kim; Sang Heum Han; Yeo Jin Won; Joon Hee Lee; Chan-Hee Kim; Takema Fukatsu; Bok Luel Lee
Journal:  Appl Environ Microbiol       Date:  2014-05-09       Impact factor: 4.792

Review 8.  Common trends in mutualism revealed by model associations between invertebrates and bacteria.

Authors:  John Chaston; Heidi Goodrich-Blair
Journal:  FEMS Microbiol Rev       Date:  2010-01       Impact factor: 16.408

9.  Previously unrecognized stages of species-specific colonization in the mutualism between Xenorhabdus bacteria and Steinernema nematodes.

Authors:  John M Chaston; Kristen E Murfin; Elizabeth A Heath-Heckman; Heidi Goodrich-Blair
Journal:  Cell Microbiol       Date:  2013-03-27       Impact factor: 3.715

Review 10.  The importance of microbes in animal development: lessons from the squid-vibrio symbiosis.

Authors:  Margaret J McFall-Ngai
Journal:  Annu Rev Microbiol       Date:  2014-06-02       Impact factor: 15.500

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