Literature DB >> 18787897

Functional genetic variation of human miRNAs and phenotypic consequences.

Christelle Borel1, Stylianos E Antonarakis.   

Abstract

A large number of human protein-coding genes are finely regulated by one or more microRNAs. Members of this small noncoding RNA family have emerged as important post-transcriptional regulators of gene expression and are involved in a number of disease phenotypes. Variability in the human genome is extensive and includes the common and rare single nucleotide polymorphisms (SNPs) and copy number variations (CNVs). The functional significance of the genome's variability is under intense investigation. In this article we review the emerging literature on how human genomic variation influences the outcome of microRNA targeting and the associated phenotypic effects. Illustrative examples are discussed that demonstrate the biological importance of functional polymorphisms affecting miRNA-mediated gene regulation.

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Year:  2008        PMID: 18787897     DOI: 10.1007/s00335-008-9137-6

Source DB:  PubMed          Journal:  Mamm Genome        ISSN: 0938-8990            Impact factor:   2.957


  84 in total

Review 1.  Role of microRNAs in plant and animal development.

Authors:  James C Carrington; Victor Ambros
Journal:  Science       Date:  2003-07-18       Impact factor: 47.728

2.  MicroRNAs acting in a double-negative feedback loop to control a neuronal cell fate decision.

Authors:  Robert J Johnston; Sarah Chang; John F Etchberger; Christopher O Ortiz; Oliver Hobert
Journal:  Proc Natl Acad Sci U S A       Date:  2005-08-12       Impact factor: 11.205

Review 3.  How do microRNAs regulate gene expression?

Authors:  Richard J Jackson; Nancy Standart
Journal:  Sci STKE       Date:  2007-01-02

4.  The mirtron pathway generates microRNA-class regulatory RNAs in Drosophila.

Authors:  Katsutomo Okamura; Joshua W Hagen; Hong Duan; David M Tyler; Eric C Lai
Journal:  Cell       Date:  2007-06-28       Impact factor: 41.582

5.  MicroRNA-155 regulates human angiotensin II type 1 receptor expression in fibroblasts.

Authors:  Mickey M Martin; Eun Joo Lee; Jessica A Buckenberger; Thomas D Schmittgen; Terry S Elton
Journal:  J Biol Chem       Date:  2006-05-04       Impact factor: 5.157

Review 6.  Angiotensin II receptor antagonists.

Authors:  M Burnier; H R Brunner
Journal:  Lancet       Date:  2000-02-19       Impact factor: 79.321

7.  The ACAA-insertion/deletion polymorphism at the 3' UTR of the IGF-II receptor gene is associated with type 2 diabetes and surrogate markers of insulin resistance.

Authors:  Gemma Villuendas; José I Botella-Carretero; Abel López-Bermejo; Carme Gubern; Wifredo Ricart; José Manuel Fernández-Real; José L San Millán; Héctor F Escobar-Morreale
Journal:  Eur J Endocrinol       Date:  2006-08       Impact factor: 6.664

8.  Low blood pressure in Down's syndrome, A link with Alzheimer's disease?

Authors:  R A Morrison; A McGrath; G Davidson; J J Brown; G D Murray; A F Lever
Journal:  Hypertension       Date:  1996-10       Impact factor: 10.190

9.  Human polymorphism at microRNAs and microRNA target sites.

Authors:  Matthew A Saunders; Han Liang; Wen-Hsiung Li
Journal:  Proc Natl Acad Sci U S A       Date:  2007-02-20       Impact factor: 11.205

10.  A mammalian microRNA expression atlas based on small RNA library sequencing.

Authors:  Pablo Landgraf; Mirabela Rusu; Robert Sheridan; Alain Sewer; Nicola Iovino; Alexei Aravin; Sébastien Pfeffer; Amanda Rice; Alice O Kamphorst; Markus Landthaler; Carolina Lin; Nicholas D Socci; Leandro Hermida; Valerio Fulci; Sabina Chiaretti; Robin Foà; Julia Schliwka; Uta Fuchs; Astrid Novosel; Roman-Ulrich Müller; Bernhard Schermer; Ute Bissels; Jason Inman; Quang Phan; Minchen Chien; David B Weir; Ruchi Choksi; Gabriella De Vita; Daniela Frezzetti; Hans-Ingo Trompeter; Veit Hornung; Grace Teng; Gunther Hartmann; Miklos Palkovits; Roberto Di Lauro; Peter Wernet; Giuseppe Macino; Charles E Rogler; James W Nagle; Jingyue Ju; F Nina Papavasiliou; Thomas Benzing; Peter Lichter; Wayne Tam; Michael J Brownstein; Andreas Bosio; Arndt Borkhardt; James J Russo; Chris Sander; Mihaela Zavolan; Thomas Tuschl
Journal:  Cell       Date:  2007-06-29       Impact factor: 41.582

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  34 in total

1.  Design and evaluation of a panel of single-nucleotide polymorphisms in microRNA genomic regions for association studies in human disease.

Authors:  Margarita Muiños-Gimeno; Magda Montfort; Mònica Bayés; Xavier Estivill; Yolanda Espinosa-Parrilla
Journal:  Eur J Hum Genet       Date:  2009-10-07       Impact factor: 4.246

Review 2.  Emerging roles for miRNAs in the development, diagnosis, and treatment of diabetic nephropathy.

Authors:  Johanna K DiStefano; Matthew Taila; M Lucrecia Alvarez
Journal:  Curr Diab Rep       Date:  2013-08       Impact factor: 4.810

Review 3.  miRNome in myocardial infarction: Future directions and perspective.

Authors:  Emanuela Boštjančič; Damjan Glavač
Journal:  World J Cardiol       Date:  2014-09-26

4.  Effects of PON polymorphisms and haplotypes on molecular phenotype in Mexican-American mothers and children.

Authors:  Karen Huen; Lisa Barcellos; Kenneth Beckman; Sherri Rose; Brenda Eskenazi; Nina Holland
Journal:  Environ Mol Mutagen       Date:  2011-03       Impact factor: 3.216

5.  Identification and functional characterization of microRNAs reveal a potential role in gastric cancer progression.

Authors:  C-Y Li; G-Y Liang; W-Z Yao; J Sui; X Shen; Y-Q Zhang; H Peng; W-W Hong; Y-C Ye; Z-Y Zhang; W-H Zhang; L-H Yin; Y-P Pu
Journal:  Clin Transl Oncol       Date:  2016-05-12       Impact factor: 3.405

6.  Comprehensive analysis of the impact of SNPs and CNVs on human microRNAs and their regulatory genes.

Authors:  Shiwei Duan; Shuangli Mi; Wei Zhang; M Eileen Dolan
Journal:  RNA Biol       Date:  2009-09-23       Impact factor: 4.652

7.  MicroRNAs: Potential biomarkers in cancer.

Authors:  G P George; Rama Devi Mittal
Journal:  Indian J Clin Biochem       Date:  2010-02-10

Review 8.  Needles in the genetic haystack of lipid disorders: single nucleotide polymorphisms in the microRNA regulome.

Authors:  Praveen Sethupathy
Journal:  J Lipid Res       Date:  2013-03-15       Impact factor: 5.922

9.  The noncoding RNAs: a genomic symphony of transcripts.

Authors:  Linda D Siracusa; Arthur M Buchberg
Journal:  Mamm Genome       Date:  2008-11-15       Impact factor: 2.957

Review 10.  Long QT syndrome: beyond the causal mutation.

Authors:  Ahmad S Amin; Yigal M Pinto; Arthur A M Wilde
Journal:  J Physiol       Date:  2013-06-10       Impact factor: 5.182

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