Literature DB >> 18786576

The yeast lysosome-like vacuole: endpoint and crossroads.

Sheena Claire Li1, Patricia M Kane.   

Abstract

Fungal vacuoles are acidic organelles with degradative and storage capabilities that have many similarities to mammalian lysosomes and plant vacuoles. In the past several years, well-developed genetic, genomic, biochemical and cell biological tools in S. cerevisiae have provided fresh insights into vacuolar protein sorting, organelle acidification, ion homeostasis, autophagy, and stress-related functions of the vacuole, and these insights have often found parallels in mammalian lysosomes. This review provides a broad overview of the defining features and functions of S. cerevisiae vacuoles and compares these features to mammalian lysosomes. Recent research challenges the traditional view of vacuoles and lysosomes as simply the terminal compartment of biosynthetic and endocytic pathways (i.e. the "garbage dump" of the cell), and suggests instead that these compartments are unexpectedly dynamic and highly regulated.

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Year:  2008        PMID: 18786576      PMCID: PMC2906225          DOI: 10.1016/j.bbamcr.2008.08.003

Source DB:  PubMed          Journal:  Biochim Biophys Acta        ISSN: 0006-3002


  201 in total

1.  Atg22 recycles amino acids to link the degradative and recycling functions of autophagy.

Authors:  Zhifen Yang; Ju Huang; Jiefei Geng; Usha Nair; Daniel J Klionsky
Journal:  Mol Biol Cell       Date:  2006-10-04       Impact factor: 4.138

2.  The a3 isoform of V-ATPase regulates insulin secretion from pancreatic beta-cells.

Authors:  Ge-Hong Sun-Wada; Takao Toyomura; Yoshiko Murata; Akitsugu Yamamoto; Masamitsu Futai; Yoh Wada
Journal:  J Cell Sci       Date:  2006-10-17       Impact factor: 5.285

Review 3.  Cell growth control: little eukaryotes make big contributions.

Authors:  C De Virgilio; R Loewith
Journal:  Oncogene       Date:  2006-10-16       Impact factor: 9.867

Review 4.  Synthesis and function of membrane phosphoinositides in budding yeast, Saccharomyces cerevisiae.

Authors:  Thomas Strahl; Jeremy Thorner
Journal:  Biochim Biophys Acta       Date:  2007-02-06

5.  A proteomics dissection of Arabidopsis thaliana vacuoles isolated from cell culture.

Authors:  Michel Jaquinod; Florent Villiers; Sylvie Kieffer-Jaquinod; Véronique Hugouvieux; Christophe Bruley; Jérôme Garin; Jacques Bourguignon
Journal:  Mol Cell Proteomics       Date:  2006-12-06       Impact factor: 5.911

6.  A phenomics approach in yeast links proton and calcium pump function in the Golgi.

Authors:  Jyoti Yadav; Sabina Muend; Yongqiang Zhang; Rajini Rao
Journal:  Mol Biol Cell       Date:  2007-02-21       Impact factor: 4.138

7.  Morphological classification of the yeast vacuolar protein sorting mutants: evidence for a prevacuolar compartment in class E vps mutants.

Authors:  C K Raymond; I Howald-Stevenson; C A Vater; T H Stevens
Journal:  Mol Biol Cell       Date:  1992-12       Impact factor: 4.138

8.  Trans-SNARE complex assembly and yeast vacuole membrane fusion.

Authors:  Kevin M Collins; William T Wickner
Journal:  Proc Natl Acad Sci U S A       Date:  2007-05-14       Impact factor: 11.205

9.  Absence of Btn1p in the yeast model for juvenile Batten disease may cause arginine to become toxic to yeast cells.

Authors:  Seasson Phillips Vitiello; Devin M Wolfe; David A Pearce
Journal:  Hum Mol Genet       Date:  2007-03-06       Impact factor: 6.150

10.  Systematic screening of polyphosphate (poly P) levels in yeast mutant cells reveals strong interdependence with primary metabolism.

Authors:  Florian M Freimoser; Hans Caspar Hürlimann; Claude A Jakob; Thomas P Werner; Nikolaus Amrhein
Journal:  Genome Biol       Date:  2006       Impact factor: 13.583

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  158 in total

1.  Mössbauer and EPR study of iron in vacuoles from fermenting Saccharomyces cerevisiae.

Authors:  Allison L Cockrell; Gregory P Holmes-Hampton; Sean P McCormick; Mrinmoy Chakrabarti; Paul A Lindahl
Journal:  Biochemistry       Date:  2011-11-02       Impact factor: 3.162

2.  Subunit interactions at the V1-Vo interface in yeast vacuolar ATPase.

Authors:  Rebecca A Oot; Stephan Wilkens
Journal:  J Biol Chem       Date:  2012-02-24       Impact factor: 5.157

3.  The V-ATPase proteolipid cylinder promotes the lipid-mixing stage of SNARE-dependent fusion of yeast vacuoles.

Authors:  Bernd Strasser; Justyna Iwaszkiewicz; Olivier Michielin; Andreas Mayer
Journal:  EMBO J       Date:  2011-09-20       Impact factor: 11.598

4.  Extensive proteomic remodeling is induced by eukaryotic translation elongation factor 1Bγ deletion in Aspergillus fumigatus.

Authors:  Grainne O'Keeffe; Christoph Jöchl; Kevin Kavanagh; Sean Doyle
Journal:  Protein Sci       Date:  2013-09-30       Impact factor: 6.725

5.  Subunit interactions and requirements for inhibition of the yeast V1-ATPase.

Authors:  Heba Diab; Masashi Ohira; Mali Liu; Ester Cobb; Patricia M Kane
Journal:  J Biol Chem       Date:  2009-03-19       Impact factor: 5.157

6.  Organelle acidification is important for localisation of vacuolar proteins in Saccharomyces cerevisiae.

Authors:  Risa Matsumoto; Kuninori Suzuki; Yoshikazu Ohya
Journal:  Protoplasma       Date:  2013-05-25       Impact factor: 3.356

7.  Regulated assembly of vacuolar ATPase is increased during cluster disruption-induced maturation of dendritic cells through a phosphatidylinositol 3-kinase/mTOR-dependent pathway.

Authors:  Rachel Liberman; Sarah Bond; Mara G Shainheit; Miguel J Stadecker; Michael Forgac
Journal:  J Biol Chem       Date:  2013-11-22       Impact factor: 5.157

8.  Functional Differences in the Blooming Phytoplankton Heterosigma akashiwo and Prorocentrum donghaiense Revealed by Comparative Metaproteomics.

Authors:  Hao Zhang; Yan-Bin He; Peng-Fei Wu; Shu-Feng Zhang; Zhang-Xian Xie; Dong-Xu Li; Lin Lin; Feng Chen; Da-Zhi Wang
Journal:  Appl Environ Microbiol       Date:  2019-09-17       Impact factor: 4.792

9.  Photoprotective Role of Photolyase-Interacting RAD23 and Its Pleiotropic Effect on the Insect-Pathogenic Fungus Beauveria bassiana.

Authors:  Ding-Yi Wang; Ya-Ni Mou; Sen-Miao Tong; Sheng-Hua Ying; Ming-Guang Feng
Journal:  Appl Environ Microbiol       Date:  2020-05-19       Impact factor: 4.792

10.  Identification of inhibitors of vacuolar proton-translocating ATPase pumps in yeast by high-throughput screening flow cytometry.

Authors:  Rebecca M Johnson; Chris Allen; Sandra D Melman; Anna Waller; Susan M Young; Larry A Sklar; Karlett J Parra
Journal:  Anal Biochem       Date:  2009-12-14       Impact factor: 3.365

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