Literature DB >> 18785694

Ab initio QM/MM molecular dynamics study on the excited-state hydrogen transfer of 7-azaindole in water solution.

Daisuke Kina1, Akira Nakayama, Takeshi Noro, Tetsuya Taketsugu, Mark S Gordon.   

Abstract

Ab initio molecular dynamics (AIMD) simulations for the excited-state hydrogen transfer (ESHT) reaction of 7-azaindole (7AI-(H2O)n; n = 1, 2) clusters in the gas phase and in water are presented. The effective fragment potential (EFP) is employed to model the surrounding water molecules. The AIMD simulations for 7AI-H2O and 7AI-(H2O)2 clusters show an asynchronous hydrogen transfer at t approximately 50 fs after the photoexcitation. While the ESHT mechanism for 7AI-H2O in water does not change appreciably compared with that in the gas phase, the AIMD simulations on 7AI-(H2O)2 in water solution exhibit two different mechanisms. Since the tautomer form is lower in energy compared to the normal form in the S1 state, 7AI and (H2O) n fragments separate from each other after the ESHT. With the use of the results of the AIMD trajectories, the minimum energy conical intersection point in the tautomer region has also been located.

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Year:  2008        PMID: 18785694     DOI: 10.1021/jp804368p

Source DB:  PubMed          Journal:  J Phys Chem A        ISSN: 1089-5639            Impact factor:   2.781


  3 in total

1.  Noncovalent interactions in extended systems described by the effective fragment potential method: theory and application to nucleobase oligomers.

Authors:  Debashree Ghosh; Dmytro Kosenkov; Vitalii Vanovschi; Christopher F Williams; John M Herbert; Mark S Gordon; Michael W Schmidt; Lyudmila V Slipchenko; Anna I Krylov
Journal:  J Phys Chem A       Date:  2010-11-10       Impact factor: 2.781

2.  Theoretical investigation on the water-assisted excited-state proton transfer of 7-azaindole derivatives: substituent effect.

Authors:  Jiacheng Yi; Hua Fang
Journal:  J Mol Model       Date:  2017-10-14       Impact factor: 1.810

3.  A Solvent-Mediated Excited-State Intermolecular Proton Transfer Fluorescent Probe for Fe3+ Sensing and Cell Imaging.

Authors:  You Qian; Fuchun Gong; Jiguang Li; Pan Ma; Hanming Zhu; Lingzhi He; Jiaoyun Xia
Journal:  Molecules       Date:  2022-01-14       Impact factor: 4.411

  3 in total

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