| Literature DB >> 18783506 |
Richard Sherva1, Kirk Wilhelmsen, Cynthia S Pomerleau, Scott A Chasse, John P Rice, Sandy M Snedecor, Laura J Bierut, Rosalind J Neuman, Ovide F Pomerleau.
Abstract
AIMS: To extend the previously identified association between a single nucleotide polymorphism (SNP) in neuronal acetylcholine receptor subunit alpha-5 (CHRNA5) and nicotine dependence to current smoking and initial smoking-experience phenotypes. DESIGN, SETTING, PARTICIPANTS: Case-control association study with a community-based sample, comprising 363 Caucasians and 72 African Americans (203 cases, 232 controls). MEASUREMENTS: Cases had smoked > or = five cigarettes/day for > or = 5 years and had smoked at their current rate for the past 6 months. Controls had smoked between one and 100 cigarettes in their life-time, but never regularly. Participants also rated, retrospectively, pleasurable and displeasurable sensations experienced when they first smoked. We tested for associations between smoking phenotypes and the top 25 SNPs tested for association with nicotine dependence in a previous study.Entities:
Mesh:
Substances:
Year: 2008 PMID: 18783506 PMCID: PMC2582398 DOI: 10.1111/j.1360-0443.2008.02279.x
Source DB: PubMed Journal: Addiction ISSN: 0965-2140 Impact factor: 6.526
Participant characteristics and smoking history.
| Cases (smokers; n = 203) | Controls (never-smokers; n = 232) | ||||
|---|---|---|---|---|---|
| Caucasians (n = 155) | African Americans (n = 48) | Caucasians (n = 208) | African Americans (n = 24) | χ2 or F-test (P-value) | |
| Age (years) (mean ± SEM) | 38.4 ± 0.84 | 37.2 ± 1.51 | 40.2 ± 0.72 | 34.3 ± 2.14 | Status: |
| Race: | |||||
| S × R | |||||
| Sex (% female) | 48% | 35% | 55% | 63% | Status: χ2 = 1.69 (0.1932) |
| Race: χ2 = 0.45 (0.5015) | |||||
| S × R | |||||
| Education (years) (mean ± SEM) | 14.3 ± 0.16 | 13.3 ± 0.28 | 16.3 ± 0.14 | 15.2 ± 0.40 | Status: |
| Race: | |||||
| Age 1st try (mean ± SEM) | 14.7 ± 0.40 | 17.1 ± 0.73 | 15.9 ± 0.36 | 15.6 ± 1.06 | Status: |
| Race: | |||||
| S × R | |||||
| No. cigs/day (mean ± SEM) | 18.0 ± 0.69 | 13.7 ± 1.26 | Race: | ||
| Age of regular smoking (mean ± SEM) | 17.4 ± 0.40 | 19.5 ± 0.70 | Race: | ||
| Years of regular smoking (mean ± SEM) | 18.4 ± 0.96 | 12.8 ± 1.17 | Race: | ||
SEM: standard error of the mean;
S × R: status × race interaction effect.
Associations between current smoking and replication set single nucleotide polymorphisms (SNPs).
| Odds ratio (95% confidence interval) | P-value | ||||||||
|---|---|---|---|---|---|---|---|---|---|
| SNP | Chr | Position (BP) | Gene | Combined | Caucasian | African American | Combined | Caucasian | African American |
| rs7877 | 1 | 167986548 | FM01 | 1.13 (0.84–1.53) | 1.2 (0.87–1.65) | 0.78 (0.32–1.9) | 0.41 | 0.26 | 0.58 |
| rs16864387 | 1 | 168015501 | FM04 | 1.01 (0.7–1.43) | 1.17 (0.75–1.81) | 0.7 (0.38–1.3) | 0.99 | 0.49 | 0.26 |
| rs12623467 | 2 | 51136740 | NRXN1 | 1.17 (0.94–1.46) | 1.16 (0.87–1.55) | 1.14 (0.81–1.6) | 0.15 | 0.3 | 0.44 |
| rs2767 | 2 | 233108318 | CHRND | 1.14 (0.85–1.52) | 1.14 (0.83–1.57) | 1.07 (0.49–2.32) | 0.38 | 0.4 | 0.86 |
| rs2276560 | 2 | 233276424 | CHRNG | 1.08 (0.8–1.45) | 0.97 (0.7–1.33) | 3.7 (0.97–14.06) | 0.63 | 0.84 | 0.05 |
| rs6772197 | 3 | 51126839 | GRM2 | 0.85 (0.6–1.21) | 0.88 (0.58–1.31) | 0.65 (0.3–1.41) | 0.36 | 0.52 | 0.28 |
| rs3762611 | 4 | 46838216 | GABRA4 | 0.96 (0.59–1.6) | 0.91 (0.51–1.61) | 1.2 (0.45–3.2) | 0.88 | 0.75 | 0.71 |
| rs2304297 | 5 | 135717335 | TRPC7 | 0.87 (0.63–1.2) | 0.79 (0.56–1.12) | 1.86 (0.63–5.47) | 0.38 | 0.18 | 0.26 |
| rs510769 | 6 | 154454133 | OPRM1 | 1.08 (0.79–1.47) | 1.09 (0.78–1.53) | 1.03 (0.47–2.26) | 0.61 | 0.61 | 0.95 |
| rs6320 | 7 | 154300269 | HTR5A | 0.97 (0.72–1.31) | 0.91 (0.66–1.26) | 1.33 (0.63–2.81) | 0.86 | 0.57 | 0.45 |
| rs2302673 | 8 | 42727356 | CHRNA6 | 0.95 (0.68–1.34) | 0.81 (0.55–1.21) | 1.88 (0.83–4.3) | 0.78 | 0.31 | 0.13 |
| rs12380218 | 9 | 77165214 | VPS13A | 1.02 (0.73–1.43) | 0.97 (0.69–1.36) | 3.05 (0.72–13) | 0.91 | 0.85 | 0.13 |
| rs10508649 | 10 | 22902288 | PIP5K2A | 0.79 (0.36–1.73) | 0.42 (0.07–2.6) | 0.81 (0.33–1.96) | 0.56 | 0.35 | 0.64 |
| rs4142041 | 10 | 68310957 | CTNNA3 | 1.16 (0.87–1.54) | 1.12 (0.83–1.51) | 1.82 (0.58–5.67) | 0.32 | 0.44 | 0.3 |
| rs4245150 | 11 | 112869857 | DRD2 | 1.09 (0.82–1.44) | 1.02 (0.77–1.37) | 2.54 (0.76–8.48) | 0.56 | 0.86 | 0.13 |
| rs3021529 | 12 | 61831947 | AVPR1A | 1.02 (0.68–1.54) | 0.96 (0.62–1.48) | 1.71 (0.47–6.24) | 0.91 | 0.84 | 0.42 |
| rs17041074 | 12 | 107794340 | DAO | 1.01 (0.75–1.38) | 1.07 (0.76–1.5) | 0.75 (0.36–1.57) | 0.92 | 0.69 | 0.45 |
| rs16969968 | 15 | 76669980 | CHRNA5 | 1.48 (1.08–2.03) | 1.51 (1.1–2.07) | 0.68 (0.11–4.37) | 0.01 | 0.01 | 0.69 |
| rs578776 | 15 | 76675455 | CHRNA5 | 0.87 (0.64–1.2) | 0.79 (0.56–1.12) | 1.19 (0.61–2.32) | 0.39 | 0.19 | 0.61 |
| rs3813567 | 15 | 76721606 | CHRNB4 | 0.87 (0.61–1.2) | 0.84 (0.57–1.24) | 1.07 (0.49–2.35) | 0.41 | 0.38 | 0.86 |
| rs4802100 | 19 | 46187865 | CYP2D6 | 0.83 (0.49–1.43) | 0.88 (0.51–1.5) | NA | 0.5 | 0.63 | NA |
| rs2673931 | 19 | 53599281 | GRIN2D | 0.76 (0.57–1.01) | 0.74 (0.54–1) | 0.84 (0.37–1.87) | 0.06 | 0.05 | 0.66 |
| rs6045733 | 20 | 1898858 | PDYN | 0.83 (0.63–1.1) | 0.87 (0.65–1.17) | 0.59 (0.23–1.53) | 0.2 | 0.36 | 0.28 |
| rs6517442 | 21 | 38211816 | KCNJ6 | 1.08 (0.81–1.44) | 1.13 (0.83–1.53) | 0.82 (0.39–1.75) | 0.59 | 0.43 | 0.61 |
| rs1206549 | 22 | 17590414 | CLTCL1 | 0.96 (0.68–1.37) | 1.05 (0.7–1.56) | 0.69 (0.32–1.49) | 0.84 | 0.82 | 0.35 |
NA: not available.
Proportion reporting moderate or intense responses (≤3) to early experimentation with smoking.
| Cases (n = 203) | Controls (n = 232) | ||||
|---|---|---|---|---|---|
| Caucasians (n = 155) | African Americans (n = 48) | Caucasians (n = 208) | African Americans (n = 24) | χ2 (P-value) | |
| Global pleasurable | 30% | 47% | 7% | 5% | Status: χ2 = 23.2 (0.0001) |
| Race: χ2 = 0.11 (0.7390) | |||||
| S × R | |||||
| Global displeasurable | 38% | 30% | 64% | 37% | Status: χ2 = 20.6 (0.0001) |
| Race: χ2 = 5.11 (0.0238) | |||||
| S × R | |||||
| Pleasurable rush or buzz | 43% | 62% | 10% | 6% | Status: χ2 = 39.7 (0.0001) |
| Race: χ2 = 0.32 (0.5730) | |||||
| S × R | |||||
| Dizziness | 61% | 45% | 17% | 16% | Status: χ2 = 56.9 (0.0001) |
| Race: χ2 = 0.01 (0.9056) | |||||
| S × R | |||||
| Nausea | 28% | 20% | 18% | 11% | Status: χ2 = 3.91 (0.0479) |
| Race: χ2 = 0.69 (0.4054) | |||||
| S × R | |||||
| Relaxation | 27% | 45% | 4% | 0% | Status: χ2 = 25.5 (0.0001) |
| Race: χ2 = 25.5 (0.0001) | |||||
| S × R | |||||
| Coughing | 46% | 33% | 50% | 53% | Status: χ2 = 0.54 (0.4628) |
| Race: χ2 = 0.05 (0.8276) | |||||
| S × R | |||||
| Difficulty inhaling | 48% | 31% | 58% | 47% | Status: χ2 = 3.04 (0.0814) |
| Race: χ2 = 0.77 (0.3816) | |||||
| S × R | |||||
S × R: status × race interaction effect.