Literature DB >> 18780351

Sub-cellular localization of membrane proteins.

Pawel G Sadowski1, Arnoud J Groen, Paul Dupree, Kathryn S Lilley.   

Abstract

In eukaryotes, numerous complex sub-cellular structures exist. The majority of these are delineated by membranes. Many proteins are trafficked to these in order to be able to carry out their correct physiological function. Assigning the sub-cellular location of a protein is of paramount importance to biologists in the elucidation of its role and in the refinement of knowledge of cellular processes by tracing certain activities to specific organelles. Membrane proteins are a key set of proteins as these form part of the boundary of the organelles and represent many important functions such as transporters, receptors, and trafficking. They are, however, some of the most challenging proteins to work with due to poor solubility, a wide concentration range within the cell and inaccessibility to many of the tools employed in proteomics studies. This review focuses on membrane proteins with particular emphasis on sub-cellular localization in terms of methodologies that can be used to determine the accurate location of membrane proteins to organelles. We also discuss what is known about the membrane protein cohorts of major organelles.

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Year:  2008        PMID: 18780351     DOI: 10.1002/pmic.200800217

Source DB:  PubMed          Journal:  Proteomics        ISSN: 1615-9853            Impact factor:   3.984


  26 in total

1.  Atlas of Subcellular RNA Localization Revealed by APEX-Seq.

Authors:  Furqan M Fazal; Shuo Han; Kevin R Parker; Pornchai Kaewsapsak; Jin Xu; Alistair N Boettiger; Howard Y Chang; Alice Y Ting
Journal:  Cell       Date:  2019-06-20       Impact factor: 41.582

Review 2.  A proteomics approach to membrane trafficking.

Authors:  Arnoud J Groen; Sacco C de Vries; Kathryn S Lilley
Journal:  Plant Physiol       Date:  2008-08       Impact factor: 8.340

3.  Metabolic labeling and membrane fractionation for comparative proteomic analysis of Arabidopsis thaliana suspension cell cultures.

Authors:  Witold G Szymanski; Sylwia Kierszniowska; Waltraud X Schulze
Journal:  J Vis Exp       Date:  2013-09-28       Impact factor: 1.355

4.  Identification of Regulatory and Cargo Proteins of Endosomal and Secretory Pathways in Arabidopsis thaliana by Proteomic Dissection.

Authors:  William Heard; Jan Sklenář; Daniel F A Tomé; Silke Robatzek; Alexandra M E Jones
Journal:  Mol Cell Proteomics       Date:  2015-04-21       Impact factor: 5.911

5.  Identification of downstream components of ubiquitin-conjugating enzyme PHOSPHATE2 by quantitative membrane proteomics in Arabidopsis roots.

Authors:  Teng-Kuei Huang; Chia-Li Han; Shu-I Lin; Yu-Ju Chen; Yi-Chuan Tsai; Yet-Ran Chen; June-Wei Chen; Wei-Yi Lin; Pei-Mien Chen; Tzu-Yin Liu; Ying-Shin Chen; Ching-Mei Sun; Tzyy-Jen Chiou
Journal:  Plant Cell       Date:  2013-10-11       Impact factor: 11.277

6.  Proteomic mapping of cytosol-facing outer mitochondrial and ER membranes in living human cells by proximity biotinylation.

Authors:  Victoria Hung; Stephanie S Lam; Namrata D Udeshi; Tanya Svinkina; Gaelen Guzman; Vamsi K Mootha; Steven A Carr; Alice Y Ting
Journal:  Elife       Date:  2017-04-25       Impact factor: 8.140

7.  Grapevine and Arabidopsis Cation-Chloride Cotransporters Localize to the Golgi and Trans-Golgi Network and Indirectly Influence Long-Distance Ion Transport and Plant Salt Tolerance.

Authors:  Sam W Henderson; Stefanie Wege; Jiaen Qiu; Deidre H Blackmore; Amanda R Walker; Stephen D Tyerman; Rob R Walker; Matthew Gilliham
Journal:  Plant Physiol       Date:  2015-09-16       Impact factor: 8.340

8.  A novel approach to dissect the abscission process in Arabidopsis.

Authors:  Zinnia Haydee González-Carranza; Ahmad Ali Shahid; Li Zhang; Yang Liu; Unchalee Ninsuwan; Jeremy Alan Roberts
Journal:  Plant Physiol       Date:  2012-09-19       Impact factor: 8.340

9.  Reproducible method to enrich membrane proteins with high purity and high yield for an LC-MS/MS approach in quantitative membrane proteomics.

Authors:  Xianyin Lai
Journal:  Electrophoresis       Date:  2013-02-25       Impact factor: 3.535

Review 10.  Mass spectrometry of membrane proteins: a focus on aquaporins.

Authors:  Kevin L Schey; Angus C Grey; Joshua J Nicklay
Journal:  Biochemistry       Date:  2013-03-13       Impact factor: 3.162

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