Literature DB >> 18780349

Strategies for shotgun identification of integral membrane proteins by tandem mass spectrometry.

Bingwen Lu1, Daniel B McClatchy, Jin Young Kim, John R Yates.   

Abstract

Integral membrane proteins (IMPs) are difficult to identify, mainly for two reasons: the hydrophobicity of IMPs and their low abundance. Sample preparation is a key component in the large-scale identification of IMPs. In this review, we survey strategies for shotgun identification of IMPs by MS/MS. We will discuss enrichment, solubilization, separation, and digestion of IMPs, and data analysis for membrane proteomics.

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Year:  2008        PMID： 18780349     DOI： 10.1002/pmic.200800120

Source DB:  PubMed          Journal:  Proteomics        ISSN： 1615-9853            Impact factor:   3.984


  19 in total

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Review 2.  Thematic review series: proteomics. Proteomic analysis of lipid-protein complexes.

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5.  Participation of vaccinia virus l2 protein in the formation of crescent membranes and immature virions.

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6.  Improved recovery and identification of membrane proteins from rat hepatic cells using a centrifugal proteomic reactor.

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8.  Sample prefractionation for mass spectrometry quantification of low-abundance membrane proteins.

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Journal:  Anal Chem       Date:  2012-05-30       Impact factor: 6.986

9.  Extraction, Enrichment, Solubilization, and Digestion Techniques for Membrane Proteomics.

Authors:  Stephanie M Moore; Stephanie M Hess; James W Jorgenson
Journal:  J Proteome Res       Date:  2016-03-24       Impact factor: 4.466

10.  The state of the human proteome in 2012 as viewed through PeptideAtlas.

Authors:  Terry Farrah; Eric W Deutsch; Michael R Hoopmann; Janice L Hallows; Zhi Sun; Chung-Ying Huang; Robert L Moritz
Journal:  J Proteome Res       Date:  2012-12-05       Impact factor: 4.466
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