Literature DB >> 18776332

Isoenergetic microarray mapping--the advantages of this method in studying the structure of Saccharomyces cerevisiae tRNAPhe.

Michal Jenek1, Elzbieta Kierzek.   

Abstract

Isoenergetic microarrays were applied to study the structure of processed S. cerevisiae tRNA(Phe) and its unmodified transcript. Results of hybridization experiments demonstrate significant differences in binding of both RNAs. The microarray mapping approach provides similar structural information as traditional chemical or enzymatic mapping, but is superior in several ways.

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Year:  2008        PMID: 18776332     DOI: 10.1093/nass/nrn111

Source DB:  PubMed          Journal:  Nucleic Acids Symp Ser (Oxf)        ISSN: 0261-3166


  4 in total

1.  Chemical synthesis of LNA-2-thiouridine and its influence on stability and selectivity of oligonucleotide binding to RNA.

Authors:  Marta Carlucci; Elzbieta Kierzek; Anna Olejnik; Douglas H Turner; Ryszard Kierzek
Journal:  Biochemistry       Date:  2009-11-24       Impact factor: 3.162

2.  Improvement of RNA secondary structure prediction using RNase H cleavage and randomized oligonucleotides.

Authors:  Andrew D Kauffmann; Ryan J Campagna; Chantal B Bartels; Jessica L Childs-Disney
Journal:  Nucleic Acids Res       Date:  2009-07-13       Impact factor: 16.971

3.  Isoenergetic microarrays to study the structure and interactions of DsrA and OxyS RNAs in two- and three-component complexes.

Authors:  Agata Fratczak; Ryszard Kierzek; Elzbieta Kierzek
Journal:  Biochemistry       Date:  2011-08-15       Impact factor: 3.321

Review 4.  Microarrays for identifying binding sites and probing structure of RNAs.

Authors:  Ryszard Kierzek; Douglas H Turner; Elzbieta Kierzek
Journal:  Nucleic Acids Res       Date:  2014-12-12       Impact factor: 16.971

  4 in total

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