Literature DB >> 18776252

Characterization of endogenous human Argonautes and their miRNA partners in RNA silencing.

Mikiko C Siomi1, Haruhiko Siomi.   

Abstract

Small RNAs triggering RNA silencing are loaded onto Argonautes and then sequence-specifically guide them to target transcripts. Epitope-tagged human Argonautes (hAgo1, hAgo2, hAgo3, and hAgo4) are associated with siRNAs and miRNAs, but only epitope-tagged hAgo2 has been shown to have Slicer activity. Contrarily, how endogenous hAgos behave in respect to small RNA association and target RNA destruction has remained unclear. Recently, we produced monoclonal antibodies for individual hAgos and characterized small RNAs specifically associated with hAgo2 and hAgo3 endogenously expressed in Jurkat cells.

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Year:  2008        PMID: 18776252     DOI: 10.1093/nass/nrn030

Source DB:  PubMed          Journal:  Nucleic Acids Symp Ser (Oxf)        ISSN: 0261-3166


  6 in total

1.  miRNA arm selection and isomiR distribution in gastric cancer.

Authors:  Sung-Chou Li; Yu-Lun Liao; Meng-Ru Ho; Kuo-Wang Tsai; Chun-Hung Lai; Wen-chang Lin
Journal:  BMC Genomics       Date:  2012-01-17       Impact factor: 3.969

2.  MicroRNAs and their isomiRs function cooperatively to target common biological pathways.

Authors:  Nicole Cloonan; Shivangi Wani; Qinying Xu; Jian Gu; Kristi Lea; Sheila Heater; Catalin Barbacioru; Anita L Steptoe; Hilary C Martin; Ehsan Nourbakhsh; Keerthana Krishnan; Brooke Gardiner; Xiaohui Wang; Katia Nones; Jason A Steen; Nicholas A Matigian; David L Wood; Karin S Kassahn; Nic Waddell; Jill Shepherd; Clarence Lee; Jeff Ichikawa; Kevin McKernan; Kelli Bramlett; Scott Kuersten; Sean M Grimmond
Journal:  Genome Biol       Date:  2011-12-30       Impact factor: 13.583

3.  Characterization of the mammalian miRNA turnover landscape.

Authors:  Yanwen Guo; Jun Liu; Sarah J Elfenbein; Yinghong Ma; Mei Zhong; Caihong Qiu; Ye Ding; Jun Lu
Journal:  Nucleic Acids Res       Date:  2015-02-04       Impact factor: 16.971

4.  MicroRNA 3' end nucleotide modification patterns and arm selection preference in liver tissues.

Authors:  Sung-Chou Li; Kuo-Wang Tsai; Hung-Wei Pan; Yung-Ming Jeng; Meng-Ru Ho; Wen-Hsiung Li
Journal:  BMC Syst Biol       Date:  2012-12-12

5.  Profiling of T helper cell-derived small RNAs reveals unique antisense transcripts and differential association of miRNAs with argonaute proteins 1 and 2.

Authors:  Sumanth Polikepahad; David B Corry
Journal:  Nucleic Acids Res       Date:  2012-11-26       Impact factor: 16.971

6.  Identification and characterization of novel and conserved microRNAs in several tissues of the Chinese rare minnow (Gobiocypris rarus) based on illumina deep sequencing technology.

Authors:  Xiangsheng Hong; Jianhui Qin; Rui Chen; Lilai Yuan; Jinmiao Zha; Zijian Wang
Journal:  BMC Genomics       Date:  2016-04-12       Impact factor: 3.969

  6 in total

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