Literature DB >> 18773922

A new concept of a unified parameter management, experiment control, and data analysis in fMRI: application to real-time fMRI at 3T and 7T.

M Hollmann1, T Mönch, S Mulla-Osman, C Tempelmann, J Stadler, J Bernarding.   

Abstract

In functional MRI (fMRI) complex experiments and applications require increasingly complex parameter handling as the experimental setup usually consists of separated soft- and hardware systems. Advanced real-time applications such as neurofeedback-based training or brain computer interfaces (BCIs) may even require adaptive changes of the paradigms and experimental setup during the measurement. This would be facilitated by an automated management of the overall workflow and a control of the communication between all experimental components. We realized a concept based on an XML software framework called Experiment Description Language (EDL). All parameters relevant for real-time data acquisition, real-time fMRI (rtfMRI) statistical data analysis, stimulus presentation, and activation processing are stored in one central EDL file, and processed during the experiment. A usability study comparing the central EDL parameter management with traditional approaches showed an improvement of the complete experimental handling. Based on this concept, a feasibility study realizing a dynamic rtfMRI-based brain computer interface showed that the developed system in combination with EDL was able to reliably detect and evaluate activation patterns in real-time. The implementation of a centrally controlled communication between the subsystems involved in the rtfMRI experiments reduced potential inconsistencies, and will open new applications for adaptive BCIs.

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Year:  2008        PMID: 18773922     DOI: 10.1016/j.jneumeth.2008.08.013

Source DB:  PubMed          Journal:  J Neurosci Methods        ISSN: 0165-0270            Impact factor:   2.390


  5 in total

1.  A proof-of-principle study of multi-site real-time functional imaging at 3T and 7T: Implementation and validation.

Authors:  Sebastian Baecke; Ralf Lützkendorf; Johannes Mallow; Michael Luchtmann; Claus Tempelmann; Jörg Stadler; Johannes Bernarding
Journal:  Sci Rep       Date:  2015-02-12       Impact factor: 4.379

2.  Predicting decisions in human social interactions using real-time fMRI and pattern classification.

Authors:  Maurice Hollmann; Jochem W Rieger; Sebastian Baecke; Ralf Lützkendorf; Charles Müller; Daniela Adolf; Johannes Bernarding
Journal:  PLoS One       Date:  2011-10-07       Impact factor: 3.752

3.  Flexible adaptive paradigms for fMRI using a novel software package 'Brain Analysis in Real-Time' (BART).

Authors:  Lydia Hellrung; Maurice Hollmann; Oliver Zscheyge; Torsten Schlumm; Christian Kalberlah; Elisabeth Roggenhofer; Hadas Okon-Singer; Arno Villringer; Annette Horstmann
Journal:  PLoS One       Date:  2015-04-02       Impact factor: 3.240

4.  Online tracking of the contents of conscious perception using real-time fMRI.

Authors:  Christoph Reichert; Robert Fendrich; Johannes Bernarding; Claus Tempelmann; Hermann Hinrichs; Jochem W Rieger
Journal:  Front Neurosci       Date:  2014-05-23       Impact factor: 4.677

Review 5.  Quality and denoising in real-time functional magnetic resonance imaging neurofeedback: A methods review.

Authors:  Stephan Heunis; Rolf Lamerichs; Svitlana Zinger; Cesar Caballero-Gaudes; Jacobus F A Jansen; Bert Aldenkamp; Marcel Breeuwer
Journal:  Hum Brain Mapp       Date:  2020-04-25       Impact factor: 5.038

  5 in total

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