Literature DB >> 18771669

Assessment of sample collection and storage methods for multicenter immunologic research in children.

Loren A Matheson1, Trang T Duong, Alan M Rosenberg, Rae S M Yeung.   

Abstract

Multicenter studies involving both large and small centers separated by significant distances pose unique challenges to biological sample collection. The objective of this study was to evaluate protocols for determining inflammatory biomarkers that are cost and manpower efficient for handling blood destined for a sample repository. Tempus (Applied Biosystems) and Paxgene (Qiagen) blood collection systems were evaluated for RNA isolation. P100 tubes (BD), containing propriety stabilizers for preservation of plasma proteins, were evaluated for protein content and compared with plasma collected in conventional tubes. Blood for plasma separation was spiked with recombinant TNF-alpha and IL-2 prior to being processed and stored under various conditions. The Tempus RNA system produced a significantly greater yield of RNA at comparable quality when stored at 4 degrees C and shipped at ambient temperature than any other condition tested. The Tempus system was 20% less expensive and required approximately 40% less processing time thereby reducing costs. The P100 system preserved recombinant TNF-alpha in blood shipped at ambient temperature significantly better than conventionally collected plasma that was shipped on dry ice. There was no significant difference in IL-2 levels between the two collection methods and shipping temperatures. The Tempus RNA blood collection tubes and the P100 protein stabilization system provide the opportunity for reliable collection and ambient temperature transport of samples in multicenter studies. This cost-effective, standardized protocol for a large multicenter trial ensures the integrity of biological samples and maximizes study participation by both large and small centers.

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Year:  2008        PMID: 18771669     DOI: 10.1016/j.jim.2008.08.003

Source DB:  PubMed          Journal:  J Immunol Methods        ISSN: 0022-1759            Impact factor:   2.303


  24 in total

Review 1.  Quality assurance of RNA expression profiling in clinical laboratories.

Authors:  Weihua Tang; Zhiyuan Hu; Hind Muallem; Margaret L Gulley
Journal:  J Mol Diagn       Date:  2011-10-20       Impact factor: 5.568

2.  Obstructive sleep apnea, excessive daytime sleepiness, and morning plasma TNF-α levels in Greek children.

Authors:  Emmanouel I Alexopoulos; Vasiliki Theologi; Georgia Malakasioti; Panagiotis Maragozidis; Irene Tsilioni; George Chrousos; Konstantinos Gourgoulianis; Athanasios G Kaditis
Journal:  Sleep       Date:  2013-11-01       Impact factor: 5.849

3.  Clinical and associated inflammatory biomarker features predictive of short-term outcomes in non-systemic juvenile idiopathic arthritis.

Authors:  Elham Rezaei; Daniel Hogan; Brett Trost; Anthony J Kusalik; Gilles Boire; David A Cabral; Sarah Campillo; Gaëlle Chédeville; Anne-Laure Chetaille; Paul Dancey; Ciaran Duffy; Karen Watanabe Duffy; John Gordon; Jaime Guzman; Kristin Houghton; Adam M Huber; Roman Jurencak; Bianca Lang; Kimberly Morishita; Kiem G Oen; Ross E Petty; Suzanne E Ramsey; Rosie Scuccimarri; Lynn Spiegel; Elizabeth Stringer; Regina M Taylor-Gjevre; Shirley M L Tse; Lori B Tucker; Stuart E Turvey; Susan Tupper; Rae S M Yeung; Susanne Benseler; Janet Ellsworth; Chantal Guillet; Chandima Karananayake; Nazeem Muhajarine; Johannes Roth; Rayfel Schneider; Alan M Rosenberg
Journal:  Rheumatology (Oxford)       Date:  2020-09-01       Impact factor: 7.580

4.  homeRNA: A Self-Sampling Kit for the Collection of Peripheral Blood and Stabilization of RNA.

Authors:  Amanda J Haack; Fang Yun Lim; Dakota S Kennedy; John H Day; Karen N Adams; Jing J Lee; Erwin Berthier; Ashleigh B Theberge
Journal:  Anal Chem       Date:  2021-09-21       Impact factor: 8.008

5.  Assessment of mRNA and microRNA Stabilization in Peripheral Human Blood for Multicenter Studies and Biobanks.

Authors:  Daniel Gilbert Weber; Swaantje Casjens; Peter Rozynek; Martin Lehnert; Sandra Zilch-Schöneweis; Oleksandr Bryk; Dirk Taeger; Maria Gomolka; Michaela Kreuzer; Heinz Otten; Beate Pesch; Georg Johnen; Thomas Brüning
Journal:  Biomark Insights       Date:  2010-09-22

6.  A practical and novel method to extract genomic DNA from blood collection kits for plasma protein preservation.

Authors:  Jon Waters; Vishal Dhere; Adam Benjamin; Arvind Sekar; Archana Kumar; Sampath Prahalad; David T Okou; Subra Kugathasan
Journal:  J Vis Exp       Date:  2013-05-18       Impact factor: 1.355

7.  Peripheral blood gene expression: it all boils down to the RNA collection tubes.

Authors:  Andreas Menke; Monika Rex-Haffner; Torsten Klengel; Elisabeth B Binder; Divya Mehta
Journal:  BMC Res Notes       Date:  2012-01-04

8.  Clinical implementation of RNA signatures for pharmacogenomic decision-making.

Authors:  Weihua Tang; Zhiyuan Hu; Hind Muallem; Margaret L Gulley
Journal:  Pharmgenomics Pers Med       Date:  2011-09-08

9.  Human blood RNA stabilization in samples collected and transported for a large biobank.

Authors:  Nur Duale; Gunnar Brunborg; Kjersti S Rønningen; Thomas Briese; Jeanette Aarem; Kaja K Aas; Per Magnus; Camilla Stoltenberg; Ezra Susser; W Ian Lipkin
Journal:  BMC Res Notes       Date:  2012-09-18

10.  Discovery of novel biomarker candidates for liver fibrosis in hepatitis C patients: a preliminary study.

Authors:  Bevin Gangadharan; Manisha Bapat; Jan Rossa; Robin Antrobus; David Chittenden; Bettina Kampa; Eleanor Barnes; Paul Klenerman; Raymond A Dwek; Nicole Zitzmann
Journal:  PLoS One       Date:  2012-06-26       Impact factor: 3.240

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