Literature DB >> 18771418

Regulation of the mouse Treacher Collins syndrome homolog (Tcof1) promoter through differential repression of constitutive expression.

Kathryn H Shows1, Rita Shiang.   

Abstract

Treacher Collins syndrome is an autosomal-dominant mandibulofacial dysostosis caused by haploinsufficiency of the TCOF1 gene product treacle. Mouse Tcof1 protein is approximately 61% identical and 71% similar to treacle, and heterozygous knockout of Tcof1 causes craniofacial malformation. Tcof1 expression is high in developing neural crest, but much lower in other tissues. To investigate this dual regulation, highly conserved regions upstream of TCOF1 homologs were tested through deletion and mutation reporter assays, and conserved predicted transcription factor binding sites were assessed through chromatin binding studies. Assays were performed in mouse P19 embryonic carcinoma cells and in HEK293 cells to determine differential activation in cell types at different stages of differentiation. Binding of Cebpb, Zfp161, and Sp1 transcription factors was specific to the Tcof1 regulatory region in P19 cells. The Zfp161 binding site demonstrated P19 cell-specific repression, while the Sp1/Sp3 candidate site demonstrated HEK293 cell-specific activation. Moreover, presence of c-myb and Zfp161 transcripts was specific to P19 cells. A minimal promoter fragment from -253 to +43 bp directs constitutive expression in both cell types, and dual regulation of Tcof1 appears to be through differential repression of this minimal promoter. The CpG island at the transcription start site remains unmethylated in P19 cells, 11.5 dpc mouse embryonic tissue, and adult mouse ear, which supports constitutive activation of the Tcof1 promoter.

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Year:  2008        PMID: 18771418      PMCID: PMC2925028          DOI: 10.1089/dna.2008.0766

Source DB:  PubMed          Journal:  DNA Cell Biol        ISSN: 1044-5498            Impact factor:   3.311


  54 in total

1.  TCOF1 mutation database: novel mutation in the alternatively spliced exon 6A and update in mutation nomenclature.

Authors:  Alessandra Splendore; Roberto D Fanganiello; Cibele Masotti; Lucas S C Morganti; M Rita Passos-Bueno
Journal:  Hum Mutat       Date:  2005-05       Impact factor: 4.878

2.  Mouse brain organization revealed through direct genome-scale TF expression analysis.

Authors:  Paul A Gray; Hui Fu; Ping Luo; Qing Zhao; Jing Yu; Annette Ferrari; Toyoaki Tenzen; Dong-In Yuk; Eric F Tsung; Zhaohui Cai; John A Alberta; Le-Ping Cheng; Yang Liu; Jan M Stenman; M Todd Valerius; Nathan Billings; Haesun A Kim; Michael E Greenberg; Andrew P McMahon; David H Rowitch; Charles D Stiles; Qiufu Ma
Journal:  Science       Date:  2004-12-24       Impact factor: 47.728

Review 3.  Transcriptional control of chondrocyte fate and differentiation.

Authors:  Véronique Lefebvre; Patrick Smits
Journal:  Birth Defects Res C Embryo Today       Date:  2005-09

4.  The Treacher Collins syndrome (TCOF1) gene product is involved in pre-rRNA methylation.

Authors:  Bianca Gonzales; Dale Henning; Rolando B So; Jill Dixon; Michael J Dixon; Benigno C Valdez
Journal:  Hum Mol Genet       Date:  2005-06-01       Impact factor: 6.150

5.  Genomewide analysis of gene expression associated with Tcof1 in mouse neuroblastoma.

Authors:  Michael Mogass; Timothy P York; Lin Li; Sinitdhorn Rujirabanjerd; Rita Shiang
Journal:  Biochem Biophys Res Commun       Date:  2004-12-03       Impact factor: 3.575

6.  Transcription factor c-Myb is involved in the regulation of the epithelial-mesenchymal transition in the avian neural crest.

Authors:  V Karafiat; M Dvorakova; E Krejci; J Kralova; P Pajer; P Snajdr; S Mandikova; P Bartunek; M Grim; M Dvorak
Journal:  Cell Mol Life Sci       Date:  2005-11       Impact factor: 9.261

7.  A functional SNP in the promoter region of TCOF1 is associated with reduced gene expression and YY1 DNA-protein interaction.

Authors:  Cibele Masotti; Lucia M Armelin-Correa; Alessandra Splendore; Chin J Lin; Angela Barbosa; Mari C Sogayar; Maria Rita Passos-Bueno
Journal:  Gene       Date:  2005-10-10       Impact factor: 3.688

8.  YY1 regulates the neural crest-associated slug gene in Xenopus laevis.

Authors:  Matthew J Morgan; Joost M Woltering; Paul M J In der Rieden; Antony J Durston; Jean Paul Thiery
Journal:  J Biol Chem       Date:  2004-08-23       Impact factor: 5.157

9.  Reduced TCOF1 mRNA level in a rhesus macaque with Treacher Collins-like syndrome: further evidence for haploinsufficiency of treacle as the cause of disease.

Authors:  Kathryn H Shows; Christy Ward; Laura Summers; Lin Li; Gregory R Ziegler; Andrew G Hendrickx; Rita Shiang
Journal:  Mamm Genome       Date:  2006-02-07       Impact factor: 2.957

10.  Novel human BTB/POZ domain-containing zinc finger protein ZNF295 is directly associated with ZFP161.

Authors:  Jun Wang; Jun Kudoh; Atsushi Takayanagi; Nobuyoshi Shimizu
Journal:  Biochem Biophys Res Commun       Date:  2005-02-11       Impact factor: 3.575

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  5 in total

Review 1.  Treacher Collins syndrome: clinical implications for the paediatrician--a new mutation in a severely affected newborn and comparison with three further patients with the same mutation, and review of the literature.

Authors:  Jan-Ulrich Schlump; Anja Stein; Ute Hehr; Tanja Karen; Claudia Möller-Hartmann; Nursel H Elcioglu; Nadja Bogdanova; Hartmut Fritz Woike; Dietmar R Lohmann; Ursula Felderhoff-Mueser; Annette Linz; Dagmar Wieczorek
Journal:  Eur J Pediatr       Date:  2012-06-23       Impact factor: 3.183

2.  The "domestication syndrome" in mammals: a unified explanation based on neural crest cell behavior and genetics.

Authors:  Adam S Wilkins; Richard W Wrangham; W Tecumseh Fitch
Journal:  Genetics       Date:  2014-07-14       Impact factor: 4.562

3.  Genome-wide DNase hypersensitivity, and occupancy of RUNX2 and CTCF reveal a highly dynamic gene regulome during MC3T3 pre-osteoblast differentiation.

Authors:  Phillip W L Tai; Hai Wu; André J van Wijnen; Gary S Stein; Janet L Stein; Jane B Lian
Journal:  PLoS One       Date:  2017-11-27       Impact factor: 3.240

4.  TCOF1 upregulation in triple-negative breast cancer promotes stemness and tumour growth and correlates with poor prognosis.

Authors:  Jianyang Hu; Yuni Lai; Hao Huang; Saravanan Ramakrishnan; Yilin Pan; Victor W S Ma; Wah Cheuk; Grace Y K So; Qingling He; C Geoffrey Lau; Liang Zhang; William C S Cho; Kui Ming Chan; Xin Wang; Y Rebecca Chin
Journal:  Br J Cancer       Date:  2021-10-30       Impact factor: 7.640

Review 5.  The Role of TCOF1 Gene in Health and Disease: Beyond Treacher Collins Syndrome.

Authors:  Małgorzata Grzanka; Agnieszka Piekiełko-Witkowska
Journal:  Int J Mol Sci       Date:  2021-03-01       Impact factor: 5.923

  5 in total

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