Literature DB >> 18771292

Engineering ascorbate peroxidase activity into cytochrome c peroxidase.

Yergalem T Meharenna1, Patricia Oertel, B Bhaskar, Thomas L Poulos.   

Abstract

Cytochrome c peroxidase (CCP) and ascorbate peroxidase (APX) have very similar structures, and yet neither CCP nor APX exhibits each other's activities with respect to reducing substrates. APX has a unique substrate binding site near the heme propionates where ascorbate H-bonds with a surface Arg and one heme propionate (Sharp et al. (2003) Nat. Struct. Biol. 10, 303-307). The corresponding region in CCP has a much longer surface loop, and the critical Arg residue that is required for ascorbate binding in APX is Asn in CCP. In order to convert CCP into an APX, the ascorbate-binding loop and critical arginine were engineered into CCP to give the CCP2APX mutant. The mutant crystal structure shows that the engineered site is nearly identical to that found in APX. While wild-type CCP shows no APX activity, CCP2APX catalyzes the peroxidation of ascorbate at a rate of approximately 12 min (-1), indicating that the engineered ascorbate-binding loop can bind ascorbate.

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Year:  2008        PMID: 18771292      PMCID: PMC2770236          DOI: 10.1021/bi8007565

Source DB:  PubMed          Journal:  Biochemistry        ISSN: 0006-2960            Impact factor:   3.162


  28 in total

1.  Two substrate binding sites in ascorbate peroxidase: the role of arginine 172.

Authors:  E H Bursey; T L Poulos
Journal:  Biochemistry       Date:  2000-06-27       Impact factor: 3.162

2.  Crystal structure of the ascorbate peroxidase-ascorbate complex.

Authors:  Katherine H Sharp; Martin Mewies; Peter C E Moody; Emma Lloyd Raven
Journal:  Nat Struct Biol       Date:  2003-04

3.  SHELXL: high-resolution refinement.

Authors:  G M Sheldrick; T R Schneider
Journal:  Methods Enzymol       Date:  1997       Impact factor: 1.600

4.  Yeast cytochrome c peroxidase: mutagenesis and expression in Escherichia coli show tryptophan-51 is not the radical site in compound I.

Authors:  L A Fishel; J E Villafranca; J M Mauro; J Kraut
Journal:  Biochemistry       Date:  1987-01-27       Impact factor: 3.162

5.  The structures of the horseradish peroxidase C-ferulic acid complex and the ternary complex with cyanide suggest how peroxidases oxidize small phenolic substrates.

Authors:  A Henriksen; A T Smith; M Gajhede
Journal:  J Biol Chem       Date:  1999-12-03       Impact factor: 5.157

6.  Redesign of cytochrome c peroxidase into a manganese peroxidase: role of tryptophans in peroxidase activity.

Authors:  A Gengenbach; S Syn; X Wang; Y Lu
Journal:  Biochemistry       Date:  1999-08-31       Impact factor: 3.162

7.  Detection of an oxyferryl porphyrin pi-cation-radical intermediate in the reaction between hydrogen peroxide and a mutant yeast cytochrome c peroxidase. Evidence for tryptophan-191 involvement in the radical site of compound I.

Authors:  J E Erman; L B Vitello; J M Mauro; J Kraut
Journal:  Biochemistry       Date:  1989-10-03       Impact factor: 3.162

8.  Role of the proximal ligand in peroxidase catalysis. Crystallographic, kinetic, and spectral studies of cytochrome c peroxidase proximal ligand mutants.

Authors:  K Choudhury; M Sundaramoorthy; A Hickman; T Yonetani; E Woehl; M F Dunn; T L Poulos
Journal:  J Biol Chem       Date:  1994-08-12       Impact factor: 5.157

9.  High-resolution crystal structures and spectroscopy of native and compound I cytochrome c peroxidase.

Authors:  Christopher A Bonagura; B Bhaskar; Hideaki Shimizu; Huiying Li; M Sundaramoorthy; Duncan E McRee; David B Goodin; Thomas L Poulos
Journal:  Biochemistry       Date:  2003-05-20       Impact factor: 3.162

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Authors:  D Dolphin; A Forman; D C Borg; J Fajer; R H Felton
Journal:  Proc Natl Acad Sci U S A       Date:  1971-03       Impact factor: 11.205

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  13 in total

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Authors:  Zhongxin Ma; Victor L Davidson
Journal:  Biochem J       Date:  2017-07-17       Impact factor: 3.857

3.  Crystal structure of Leishmania major peroxidase and characterization of the compound i tryptophan radical.

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Journal:  J Biol Chem       Date:  2011-05-12       Impact factor: 5.157

4.  Crystal structure of the pristine peroxidase ferryl center and its relevance to proton-coupled electron transfer.

Authors:  Georges Chreifi; Elizabeth L Baxter; Tzanko Doukov; Aina E Cohen; Scott E McPhillips; Jinhu Song; Yergalem T Meharenna; S Michael Soltis; Thomas L Poulos
Journal:  Proc Natl Acad Sci U S A       Date:  2016-01-19       Impact factor: 11.205

5.  Crystallographic and single-crystal spectral analysis of the peroxidase ferryl intermediate.

Authors:  Yergalem T Meharenna; Tzanko Doukov; Huiying Li; S Michael Soltis; Thomas L Poulos
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Review 6.  Thirty years of heme peroxidase structural biology.

Authors:  Thomas L Poulos
Journal:  Arch Biochem Biophys       Date:  2010-03-03       Impact factor: 4.013

7.  Ascorbate Peroxidase Neofunctionalization at the Origin of APX-R and APX-L: Evidence from Basal Archaeplastida.

Authors:  Fernanda Lazzarotto; Paloma Koprovski Menguer; Luiz-Eduardo Del-Bem; Marcel Zámocký; Márcia Margis-Pinheiro
Journal:  Antioxidants (Basel)       Date:  2021-04-13

8.  Nitric Oxide (NO) Differentially Modulates the Ascorbate Peroxidase (APX) Isozymes of Sweet Pepper (Capsicum annuum L.) Fruits.

Authors:  Salvador González-Gordo; Marta Rodríguez-Ruiz; Javier López-Jaramillo; María A Muñoz-Vargas; José M Palma; Francisco J Corpas
Journal:  Antioxidants (Basel)       Date:  2022-04-12

9.  Atomic Force Microscopy Study of Protein-Protein Interactions in the Cytochrome CYP11A1 (P450scc)-Containing Steroid Hydroxylase System.

Authors:  Y D Ivanov; P A Frantsuzov; A Zöllner; N V Medvedeva; A I Archakov; W Reinle; R Bernhardt
Journal:  Nanoscale Res Lett       Date:  2010-09-30       Impact factor: 4.703

10.  A Noncanonical Tryptophan Analogue Reveals an Active Site Hydrogen Bond Controlling Ferryl Reactivity in a Heme Peroxidase.

Authors:  Mary Ortmayer; Florence J Hardy; Matthew G Quesne; Karl Fisher; Colin Levy; Derren J Heyes; C Richard A Catlow; Sam P de Visser; Stephen E J Rigby; Sam Hay; Anthony P Green
Journal:  JACS Au       Date:  2021-05-14
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