Literature DB >> 18769913

Detailed state model of CaMKII activation and autophosphorylation.

Vladan Lucić1, Gabriela J Greif, Mary B Kennedy.   

Abstract

By combining biochemical experiments with computer modelling of biochemical reactions we elucidated some of the currently unresolved aspects of calcium-calmodulin-dependent protein kinase II (CaMKII) activation and autophosphorylation that might be relevant for its physiological function and provided a model that incorporates in detail the mechanism of CaMKII activation and autophosphorylation at T286 that is based on experimentally determined binding constants and phosphorylation rates. To this end, we developed a detailed state model of CaMKII activation and autophosphorylation based on the currently available literature, and constrained it with data from CaMKII autophosphorylation essays. Our model takes exact phosphorylation patterns of CaMKII holoenzymes into account, and is valid at physiologically relevant conditions where the concentrations of calcium and calmodulin are not saturating. Our results strongly suggest that even when bound to less than fully calcium-bound calmodulin, CaMKII is in the active state, and indicate that the autophosphorylation of T286 by an active non-phosphorylated CaMKII subunit is significantly faster than by an autophosphorylated CaMKII subunit. These results imply that CaMKII can be efficiently activated at significantly lower calcium concentrations than previously thought, which may explain how CaMKII gets activated at calcium concentrations existing at synapses in vivo. We also investigated the significance of CaMKII holoenzyme structure on CaMKII autophosphorylation and obtained estimates of previously unknown binding constants.

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Year:  2008        PMID: 18769913      PMCID: PMC2801814          DOI: 10.1007/s00249-008-0362-4

Source DB:  PubMed          Journal:  Eur Biophys J        ISSN: 0175-7571            Impact factor:   1.733


  45 in total

1.  Three-dimensional reconstructions of calcium/calmodulin-dependent (CaM) kinase IIalpha and truncated CaM kinase IIalpha reveal a unique organization for its structural core and functional domains.

Authors:  S J Kolodziej; A Hudmon; M N Waxham; J K Stoops
Journal:  J Biol Chem       Date:  2000-05-12       Impact factor: 5.157

2.  Bistability in the Ca(2+)/calmodulin-dependent protein kinase-phosphatase system.

Authors:  A M Zhabotinsky
Journal:  Biophys J       Date:  2000-11       Impact factor: 4.033

3.  Calcium sensitivity of glutamate release in a calyx-type terminal.

Authors:  J H Bollmann; B Sakmann; J G Borst
Journal:  Science       Date:  2000-08-11       Impact factor: 47.728

4.  Switching characteristics of a model for biochemical-reaction networks describing autophosphorylation versus dephosphorylation of Ca2+/calmodulin-dependent protein kinase II.

Authors:  H Okamoto; K Ichikawa
Journal:  Biol Cybern       Date:  2000-01       Impact factor: 2.086

5.  Transient versus asymptotic dynamics of CaM kinase II: possible roles of phosphatase.

Authors:  Y Kubota; J M Bower
Journal:  J Comput Neurosci       Date:  2001 Nov-Dec       Impact factor: 1.621

6.  Ca2+/calmodulin-dependent protein kinase II (CaMKII) is activated by calmodulin with two bound calciums.

Authors:  Julia M Shifman; Mee H Choi; Stefan Mihalas; Stephen L Mayo; Mary B Kennedy
Journal:  Proc Natl Acad Sci U S A       Date:  2006-09-11       Impact factor: 11.205

7.  Models of calmodulin trapping and CaM kinase II activation in a dendritic spine.

Authors:  W R Holmes
Journal:  J Comput Neurosci       Date:  2000 Jan-Feb       Impact factor: 1.621

8.  Intracellular calcium dependence of transmitter release rates at a fast central synapse.

Authors:  R Schneggenburger; E Neher
Journal:  Nature       Date:  2000-08-24       Impact factor: 49.962

9.  Interaction with the NMDA receptor locks CaMKII in an active conformation.

Authors:  K U Bayer; P De Koninck; A S Leonard; J W Hell; H Schulman
Journal:  Nature       Date:  2001-06-14       Impact factor: 49.962

10.  Molecular characterization of calmodulin trapping by calcium/calmodulin-dependent protein kinase II.

Authors:  S I Singla; A Hudmon; J M Goldberg; J L Smith; H Schulman
Journal:  J Biol Chem       Date:  2001-05-30       Impact factor: 5.157

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  24 in total

1.  Covert Changes in CaMKII Holoenzyme Structure Identified for Activation and Subsequent Interactions.

Authors:  Tuan A Nguyen; Pabak Sarkar; Jithesh V Veetil; Kaitlin A Davis; Henry L Puhl; Steven S Vogel
Journal:  Biophys J       Date:  2015-05-05       Impact factor: 4.033

2.  Sequestration of CaMKII in dendritic spines in silico.

Authors:  Shahid Khan; Yixiao Zou; Asma Amjad; Ailia Gardezi; Carolyn L Smith; Christine Winters; Thomas S Reese
Journal:  J Comput Neurosci       Date:  2011-04-14       Impact factor: 1.621

3.  A novel explanation for observed CaMKII dynamics in dendritic spines with added EGTA or BAPTA.

Authors:  Matt Matolcsi; Nicholas Giordano
Journal:  Biophys J       Date:  2015-02-17       Impact factor: 4.033

Review 4.  Control of cell mechanics by RhoA and calcium fluxes during epithelial scattering.

Authors:  Hillary J Haws; Melissa A McNeil; Marc D H Hansen
Journal:  Tissue Barriers       Date:  2016-05-11

Review 5.  Regulation of gastrointestinal motility by Ca2+/calmodulin-stimulated protein kinase II.

Authors:  Brian A Perrino
Journal:  Arch Biochem Biophys       Date:  2011-04-03       Impact factor: 4.013

6.  Computational analysis of the regulation of Ca(2+) dynamics in rat ventricular myocytes.

Authors:  Scott M Bugenhagen; Daniel A Beard
Journal:  Phys Biol       Date:  2015-09-11       Impact factor: 2.583

7.  CaMKII activation and dynamics are independent of the holoenzyme structure: an infinite subunit holoenzyme approximation.

Authors:  P J Michalski; L M Loew
Journal:  Phys Biol       Date:  2012-06-08       Impact factor: 2.583

8.  The delicate bistability of CaMKII.

Authors:  P J Michalski
Journal:  Biophys J       Date:  2013-08-06       Impact factor: 4.033

Review 9.  Structural studies on the regulation of Ca2+/calmodulin dependent protein kinase II.

Authors:  Margaret M Stratton; Luke H Chao; Howard Schulman; John Kuriyan
Journal:  Curr Opin Struct Biol       Date:  2013-04-27       Impact factor: 6.809

10.  Intersubunit capture of regulatory segments is a component of cooperative CaMKII activation.

Authors:  Luke H Chao; Patricia Pellicena; Sebastian Deindl; Lauren A Barclay; Howard Schulman; John Kuriyan
Journal:  Nat Struct Mol Biol       Date:  2010-02-07       Impact factor: 15.369

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