Literature DB >> 18767842

Ultrafast dynamics of flavins in five redox states.

Ya-Ting Kao1, Chaitanya Saxena, Ting-Fang He, Lijun Guo, Lijuan Wang, Aziz Sancar, Dongping Zhong.   

Abstract

We report here our systematic studies of excited-state dynamics of two common flavin molecules, FMN and FAD, in five redox states--oxidized form, neutral and anionic semiquinones, and neutral and anionic fully reduced hydroquinones--in solution and in inert protein environments with femtosecond resolution. Using protein environments, we were able to stabilize two semiquinone radicals and thus observed their weak emission spectra. Significantly, we observed a strong correlation between their excited-state dynamics and the planarity of their flavin isoalloxazine ring. For a bent ring structure, we observed ultrafast dynamics from a few to hundreds of picoseconds and strong excitation-wavelength dependence of emission spectra, indicating deactivation during relaxation. A butterfly bending motion is invoked to get access to conical intersection(s) to facilitate deactivation. These states include the anionic semiquinone radical and fully reduced neutral and anionic hydroquinones in solution. In a planar configuration, flavins have a long lifetime of nanoseconds, except for the stacked conformation of FAD, where intramolecular electron transfer between the ring and the adenine moiety in 5-9 ps as well as subsequent charge recombination in 30-40 ps were observed. These observed distinct dynamics, controlled by the flavin ring flexibility, are fundamental to flavoenzyme's functions, as observed in photolyase with a planar structure to lengthen the lifetime to maximize DNA repair efficiency and in insect type 1 cryptochrome with a flexible structure to vary the excited-state deactivation to modulate the functional channel.

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Year:  2008        PMID: 18767842      PMCID: PMC2637805          DOI: 10.1021/ja8045469

Source DB:  PubMed          Journal:  J Am Chem Soc        ISSN: 0002-7863            Impact factor:   15.419


  72 in total

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10.  Role of structural plasticity in signal transduction by the cryptochrome blue-light photoreceptor.

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Journal:  Biochemistry       Date:  2005-03-15       Impact factor: 3.162

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  55 in total

Review 1.  Fluorescence lifetime measurements and biological imaging.

Authors:  Mikhail Y Berezin; Samuel Achilefu
Journal:  Chem Rev       Date:  2010-05-12       Impact factor: 60.622

Review 2.  Dynamics and mechanisms of DNA repair by photolyase.

Authors:  Zheyun Liu; Lijuan Wang; Dongping Zhong
Journal:  Phys Chem Chem Phys       Date:  2015-05-14       Impact factor: 3.676

3.  Reaction mechanism of Drosophila cryptochrome.

Authors:  Nuri Ozturk; Christopher P Selby; Yunus Annayev; Dongping Zhong; Aziz Sancar
Journal:  Proc Natl Acad Sci U S A       Date:  2010-12-27       Impact factor: 11.205

4.  Determining complete electron flow in the cofactor photoreduction of oxidized photolyase.

Authors:  Zheyun Liu; Chuang Tan; Xunmin Guo; Jiang Li; Lijuan Wang; Aziz Sancar; Dongping Zhong
Journal:  Proc Natl Acad Sci U S A       Date:  2013-07-23       Impact factor: 11.205

5.  Dynamic determination of the functional state in photolyase and the implication for cryptochrome.

Authors:  Zheyun Liu; Meng Zhang; Xunmin Guo; Chuang Tan; Jiang Li; Lijuan Wang; Aziz Sancar; Dongping Zhong
Journal:  Proc Natl Acad Sci U S A       Date:  2013-07-23       Impact factor: 11.205

6.  Ultrafast solvation dynamics at binding and active sites of photolyases.

Authors:  Chih-Wei Chang; Lijun Guo; Ya-Ting Kao; Jiang Li; Chuang Tan; Tanping Li; Chaitanya Saxena; Zheyun Liu; Lijuan Wang; Aziz Sancar; Dongping Zhong
Journal:  Proc Natl Acad Sci U S A       Date:  2010-01-26       Impact factor: 11.205

7.  The molecular origin of high DNA-repair efficiency by photolyase.

Authors:  Chuang Tan; Zheyun Liu; Jiang Li; Xunmin Guo; Lijuan Wang; Aziz Sancar; Dongping Zhong
Journal:  Nat Commun       Date:  2015-06-11       Impact factor: 14.919

8.  Short-Range Electron Transfer in Reduced Flavodoxin: Ultrafast Nonequilibrium Dynamics Coupled with Protein Fluctuations.

Authors:  Mainak Kundu; Ting-Fang He; Yangyi Lu; Lijuan Wang; Dongping Zhong
Journal:  J Phys Chem Lett       Date:  2018-05-11       Impact factor: 6.475

9.  Fungal cryptochrome with DNA repair activity reveals an early stage in cryptochrome evolution.

Authors:  Victor G Tagua; Marcell Pausch; Maike Eckel; Gabriel Gutiérrez; Alejandro Miralles-Durán; Catalina Sanz; Arturo P Eslava; Richard Pokorny; Luis M Corrochano; Alfred Batschauer
Journal:  Proc Natl Acad Sci U S A       Date:  2015-11-17       Impact factor: 11.205

10.  Comparative photochemistry of animal type 1 and type 4 cryptochromes.

Authors:  Nuri Ozturk; Christopher P Selby; Sang-Hun Song; Rui Ye; Chuang Tan; Ya-Ting Kao; Dongping Zhong; Aziz Sancar
Journal:  Biochemistry       Date:  2009-09-15       Impact factor: 3.162

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