Literature DB >> 18765918

Coenzyme- and His-tag-induced crystallization of octopine dehydrogenase.

Sander H J Smits1, Andre Mueller, Manfred K Grieshaber, Lutz Schmitt.   

Abstract

Over the last decade, protein purification has become more efficient and standardized through the introduction of affinity tags. The choice and position of the tag, however, can directly influence the process of protein crystallization. Octopine dehydrogenase (OcDH) without a His tag and tagged protein constructs such as OcDH-His(5) and OcDH-LEHis(6) have been investigated for their crystallizability. Only OcDH-His(5) yielded crystals; however, they were multiple. To improve crystal quality, the cofactor NADH was added, resulting in single crystals that were suitable for structure determination. As shown by the structure, the His(5) tag protrudes into the cleft between the NADH and L-arginine-binding domains and is mainly fixed in place by water molecules. The protein is thereby stabilized to such an extent that the formation of crystal contacts can proceed. Together with NADH, the His(5) tag obviously locks the enzyme into a specific conformation which induces crystal growth.

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Year:  2008        PMID: 18765918      PMCID: PMC2531259          DOI: 10.1107/S1744309108025487

Source DB:  PubMed          Journal:  Acta Crystallogr Sect F Struct Biol Cryst Commun        ISSN: 1744-3091


  13 in total

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Authors:  Andre Müller; Frank Janssen; Manfred K Grieshaber
Journal:  FEBS J       Date:  2007-11-19       Impact factor: 5.542

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Authors:  Sander H J Smits; Andre Mueller; Lutz Schmitt; Manfred K Grieshaber
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  3 in total

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Authors:  Asako Kounosu; Kazuya Hasegawa; Toshio Iwasaki; Takashi Kumasaka
Journal:  Acta Crystallogr Sect F Struct Biol Cryst Commun       Date:  2010-06-24

2.  Insights into the mechanism of ligand binding to octopine dehydrogenase from Pecten maximus by NMR and crystallography.

Authors:  Sander H J Smits; Tatu Meyer; Andre Mueller; Nadine van Os; Matthias Stoldt; Dieter Willbold; Lutz Schmitt; Manfred K Grieshaber
Journal:  PLoS One       Date:  2010-08-19       Impact factor: 3.240

3.  Cloning, purification and characterization of an NAD-Dependent D-Arabitol dehydrogenase from acetic acid bacterium, Acetobacter suboxydans.

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Journal:  Protein J       Date:  2009-08       Impact factor: 2.371

  3 in total

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