Literature DB >> 18765904

Expression, purification, crystallization and preliminary X-ray studies of histamine dehydrogenase from Nocardioides simplex.

Timothy M Reed1, Hidehiko Hirakawa, Minae Mure, Emily E Scott, Julian Limburg.   

Abstract

Histamine dehydrogenase (HADH) from Nocardioides simplex catalyzes the oxidative deamination of histamine to produce imidazole acetaldehyde and an ammonium ion. HADH is functionally related to trimethylamine dehydrogenase (TMADH), but HADH has strict substrate specificity towards histamine. HADH is a homodimer, with each 76 kDa subunit containing two redox cofactors: a [4Fe-4S] cluster and an unusual covalently bound flavin mononucleotide, 6-S-cysteinyl-FMN. In order to understand the substrate specificity of HADH, it was sought to determine its structure by X-ray crystallography. This enzyme has been expressed recombinantly in Escherichia coli and successfully crystallized in two forms. Diffraction data were collected to 2.7 A resolution at the SSRL synchrotron with 99.7% completeness. The crystals belonged to the orthorhombic space group P2(1)2(1)2(1), with unit-cell parameters a = 101.14, b = 107.03, c = 153.35 A.

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Year:  2008        PMID: 18765904      PMCID: PMC2531280          DOI: 10.1107/S1744309108023336

Source DB:  PubMed          Journal:  Acta Crystallogr Sect F Struct Biol Cryst Commun        ISSN: 1744-3091


  17 in total

1.  6-S-cysteinyl flavin mononucleotide-containing histamine dehydrogenase from Nocardioides simplex: molecular cloning, sequencing, overexpression, and characterization of redox centers of enzyme.

Authors:  Nobutaka Fujieda; Atsuko Satoh; Noriaki Tsuse; Kenji Kano; Tokuji Ikeda
Journal:  Biochemistry       Date:  2004-08-24       Impact factor: 3.162

2.  Preparation of selenomethionyl proteins for phase determination.

Authors:  S Doublié
Journal:  Methods Enzymol       Date:  1997       Impact factor: 1.600

3.  An automated system to mount cryo-cooled protein crystals on a synchrotron beam line, using compact sample cassettes and a small-scale robot.

Authors:  Aina E Cohen; Paul J Ellis; Mitchell D Miller; Ashley M Deacon; R Paul Phizackerley
Journal:  J Appl Crystallogr       Date:  2002-12       Impact factor: 3.304

4.  Solvent content of protein crystals.

Authors:  B W Matthews
Journal:  J Mol Biol       Date:  1968-04-28       Impact factor: 5.469

5.  Structure of the covalently bound coenzyme of trimethylamine dehydrogenase. Evidence for a 6-substituted flavin.

Authors:  D J Steenkamp; W McIntire; W C Kenney
Journal:  J Biol Chem       Date:  1978-04-25       Impact factor: 5.157

6.  Cloning and characterization of histamine dehydrogenase from Nocardioides simplex.

Authors:  Julian Limburg; Minae Mure; Judith P Klinman
Journal:  Arch Biochem Biophys       Date:  2005-04-01       Impact factor: 4.013

Review 7.  The role of histamine H1 and H4 receptors in allergic inflammation: the search for new antihistamines.

Authors:  Robin L Thurmond; Erwin W Gelfand; Paul J Dunford
Journal:  Nat Rev Drug Discov       Date:  2008-01       Impact factor: 84.694

8.  A novel type of covalently bound coenzyme in trimethylamine dehydrogenase.

Authors:  D J Steenkamp; W C Kenney; T P Singer
Journal:  J Biol Chem       Date:  1978-04-25       Impact factor: 5.157

Review 9.  The integration of macromolecular diffraction data.

Authors:  Andrew G W Leslie
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  2005-12-14

10.  Phaser crystallographic software.

Authors:  Airlie J McCoy; Ralf W Grosse-Kunstleve; Paul D Adams; Martyn D Winn; Laurent C Storoni; Randy J Read
Journal:  J Appl Crystallogr       Date:  2007-07-13       Impact factor: 3.304

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  1 in total

1.  Crystal structure of histamine dehydrogenase from Nocardioides simplex.

Authors:  Timothy Reed; Gerald H Lushington; Yan Xia; Hidehiko Hirakawa; DeAnna M Travis; Minae Mure; Emily E Scott; Julian Limburg
Journal:  J Biol Chem       Date:  2010-06-10       Impact factor: 5.157

  1 in total

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