Literature DB >> 18764290

Statistical mechanics of steiner trees.

M Bayati1, C Borgs, A Braunstein, J Chayes, A Ramezanpour, R Zecchina.   

Abstract

The minimum weight Steiner tree (MST) is an important combinatorial optimization problem over networks that has applications in a wide range of fields. Here we discuss a general technique to translate the imposed global connectivity constrain into many local ones that can be analyzed with cavity equation techniques. This approach leads to a new optimization algorithm for MST and allows us to analyze the statistical mechanics properties of MST on random graphs of various types.

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Mesh:

Year:  2008        PMID: 18764290     DOI: 10.1103/PhysRevLett.101.037208

Source DB:  PubMed          Journal:  Phys Rev Lett        ISSN: 0031-9007            Impact factor:   9.161


  6 in total

1.  Finding undetected protein associations in cell signaling by belief propagation.

Authors:  M Bailly-Bechet; C Borgs; A Braunstein; J Chayes; A Dagkessamanskaia; J-M François; R Zecchina
Journal:  Proc Natl Acad Sci U S A       Date:  2010-12-27       Impact factor: 11.205

2.  Simultaneous reconstruction of multiple signaling pathways via the prize-collecting steiner forest problem.

Authors:  Nurcan Tuncbag; Alfredo Braunstein; Andrea Pagnani; Shao-Shan Carol Huang; Jennifer Chayes; Christian Borgs; Riccardo Zecchina; Ernest Fraenkel
Journal:  J Comput Biol       Date:  2013-02       Impact factor: 1.479

3.  The Edge-Disjoint Path Problem on Random Graphs by Message-Passing.

Authors:  Fabrizio Altarelli; Alfredo Braunstein; Luca Dall'Asta; Caterina De Bacco; Silvio Franz
Journal:  PLoS One       Date:  2015-12-28       Impact factor: 3.240

4.  Swimming upstream: identifying proteomic signals that drive transcriptional changes using the interactome and multiple "-omics" datasets.

Authors:  Shao-shan Carol Huang; Ernest Fraenkel
Journal:  Methods Cell Biol       Date:  2012       Impact factor: 1.441

5.  Shape similarity, better than semantic membership, accounts for the structure of visual object representations in a population of monkey inferotemporal neurons.

Authors:  Carlo Baldassi; Alireza Alemi-Neissi; Marino Pagan; James J Dicarlo; Riccardo Zecchina; Davide Zoccolan
Journal:  PLoS Comput Biol       Date:  2013-08-08       Impact factor: 4.475

6.  Network extraction by routing optimization.

Authors:  Diego Baptista; Daniela Leite; Enrico Facca; Mario Putti; Caterina De Bacco
Journal:  Sci Rep       Date:  2020-11-30       Impact factor: 4.379

  6 in total

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