Literature DB >> 18762772

Transfer RNA genes in pieces are an ancestral character.

Massimo Di Giulio.   

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Year:  2008        PMID： 18762772      PMCID： PMC2529356          DOI： 10.1038/embor.2008.153

Source DB:  PubMed          Journal:  EMBO Rep        ISSN： 1469-221X            Impact factor:   8.807


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  5 in total

Review 1.  The natural history of group I introns.

Authors:  Peik Haugen; Dawn M Simon; Debashish Bhattacharya
Journal:  Trends Genet       Date:  2005-02       Impact factor: 11.639

2.  The non-monophyletic origin of the tRNA molecule and the origin of genes only after the evolutionary stage of the last universal common ancestor (LUCA).

Authors:  Massimo Di Giulio
Journal:  J Theor Biol       Date:  2005-11-11       Impact factor: 2.691

3.  Transfer RNA genes in pieces.

Authors:  Lennart Randau; Dieter Söll
Journal:  EMBO Rep       Date:  2008-06-13       Impact factor: 8.807

4.  tRNAscan-SE: a program for improved detection of transfer RNA genes in genomic sequence.

Authors:  T M Lowe; S R Eddy
Journal:  Nucleic Acids Res       Date:  1997-03-01       Impact factor: 16.971

5.  Permuted tRNA genes of Cyanidioschyzon merolae, the origin of the tRNA molecule and the root of the Eukarya domain.

Authors:  Massimo Di Giulio
Journal:  J Theor Biol       Date:  2008-04-29       Impact factor: 2.691
  5 in total
  10 in total

1.  Tri-split tRNA is a transfer RNA made from 3 transcripts that provides insight into the evolution of fragmented tRNAs in archaea.

Authors:  Kosuke Fujishima; Junichi Sugahara; Kaoru Kikuta; Reiko Hirano; Asako Sato; Masaru Tomita; Akio Kanai
Journal:  Proc Natl Acad Sci U S A       Date:  2009-02-03       Impact factor: 11.205

2.  Formal proof that the split genes of tRNAs of Nanoarchaeum equitans are an ancestral character.

Authors:  Massimo Di Giulio
Journal:  J Mol Evol       Date:  2009-09-17       Impact factor: 2.395

3.  The presence in tRNA molecule sequences of the double hairpin, an evolutionary stage through which the origin of this molecule is thought to have passed.

Authors:  Sergio Branciamore; Massimo Di Giulio
Journal:  J Mol Evol       Date:  2011-03-17       Impact factor: 2.395

4.  The indefinable term 'prokaryote' and the polyphyletic origin of genes.

Authors:  Massimo Di Giulio
Journal:  J Genet       Date:  2017-06       Impact factor: 1.166

Review 5.  Diversity and roles of (t)RNA ligases.

Authors:  Johannes Popow; Alexander Schleiffer; Javier Martinez
Journal:  Cell Mol Life Sci       Date:  2012-03-17       Impact factor: 9.261

6.  On origin of genetic code and tRNA before translation.

Authors:  Andrei S Rodin; Eörs Szathmáry; Sergei N Rodin
Journal:  Biol Direct       Date:  2011-02-22       Impact factor: 4.540

7.  Identification of highly-disrupted tRNA genes in nuclear genome of the red alga, Cyanidioschyzon merolae 10D.

Authors:  Akiko Soma; Junichi Sugahara; Akinori Onodera; Nozomu Yachie; Akio Kanai; Satoru Watanabe; Hirofumi Yoshikawa; Mio Ohnuma; Haruko Kuroiwa; Tsuneyoshi Kuroiwa; Yasuhiko Sekine
Journal:  Sci Rep       Date:  2013       Impact factor: 4.379

8.  Novel Genomic and Evolutionary Perspective of Cyanobacterial tRNAs.

Authors:  Tapan K Mohanta; Asad S Syed; Fuad Ameen; Hanhong Bae
Journal:  Front Genet       Date:  2017-12-13       Impact factor: 4.599

9.  Interdependence, Reflexivity, Fidelity, Impedance Matching, and the Evolution of Genetic Coding.

Authors:  Charles W Carter; Peter R Wills
Journal:  Mol Biol Evol       Date:  2018-02-01       Impact factor: 16.240

10.  Comparisons between small ribosomal RNA and theoretical minimal RNA ring secondary structures confirm phylogenetic and structural accretion histories.

Authors:  Jacques Demongeot; Hervé Seligmann
Journal:  Sci Rep       Date:  2020-05-06       Impact factor: 4.379
  10 in total

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