Literature DB >> 18760356

Towards systems metabolic engineering of microorganisms for amino acid production.

Jin Hwan Park1, Sang Yup Lee.   

Abstract

Microorganisms capable of efficient production of amino acids have traditionally been developed by random mutation and selection method, which might cause unwanted physiological changes in cellular metabolism. Rational genome-wide metabolic engineering based on systems and synthetic biology tools, which is termed 'systems metabolic engineering', is rising as an alternative to overcome these problems. Recently, several amino acid producers have been successfully developed by systems metabolic engineering, where the metabolic engineering procedures were performed within a systems biology framework, and entire metabolic networks, including complex regulatory circuits, were engineered in an integrated manner. Here we review the current status of systems metabolic engineering successfully applied for developing amino acid producing strains and discuss future prospects.

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Year:  2008        PMID: 18760356     DOI: 10.1016/j.copbio.2008.08.007

Source DB:  PubMed          Journal:  Curr Opin Biotechnol        ISSN: 0958-1669            Impact factor:   9.740


  38 in total

1.  Prediction of metabolic fluxes by incorporating genomic context and flux-converging pattern analyses.

Authors:  Jong Myoung Park; Tae Yong Kim; Sang Yup Lee
Journal:  Proc Natl Acad Sci U S A       Date:  2010-08-02       Impact factor: 11.205

2.  Heterologous and homologous expression of the arginine biosynthetic argC~H cluster from Corynebacterium crenatum for improvement of (L) -arginine production.

Authors:  Meijuan Xu; Zhiming Rao; Juan Yang; Haifeng Xia; Wenfang Dou; Jian Jin; Zhenghong Xu
Journal:  J Ind Microbiol Biotechnol       Date:  2011-10-19       Impact factor: 3.346

3.  Rational engineering of multiple module pathways for the production of L-phenylalanine in Corynebacterium glutamicum.

Authors:  Chuanzhi Zhang; Junli Zhang; Zhen Kang; Guocheng Du; Jian Chen
Journal:  J Ind Microbiol Biotechnol       Date:  2015-02-10       Impact factor: 3.346

Review 4.  The future of metabolic engineering and synthetic biology: towards a systematic practice.

Authors:  Vikramaditya G Yadav; Marjan De Mey; Chin Giaw Lim; Parayil Kumaran Ajikumar; Gregory Stephanopoulos
Journal:  Metab Eng       Date:  2012-05       Impact factor: 9.783

Review 5.  Constraint-based models predict metabolic and associated cellular functions.

Authors:  Aarash Bordbar; Jonathan M Monk; Zachary A King; Bernhard O Palsson
Journal:  Nat Rev Genet       Date:  2014-01-16       Impact factor: 53.242

6.  Bottom-up approaches in synthetic biology and biomaterials for tissue engineering applications.

Authors:  Mitchell S Weisenberger; Tara L Deans
Journal:  J Ind Microbiol Biotechnol       Date:  2018-03-19       Impact factor: 3.346

7.  A synthetic low-frequency mammalian oscillator.

Authors:  Marcel Tigges; Nicolas Dénervaud; David Greber; Joerg Stelling; Martin Fussenegger
Journal:  Nucleic Acids Res       Date:  2010-03-02       Impact factor: 16.971

8.  Utilizing elementary mode analysis, pathway thermodynamics, and a genetic algorithm for metabolic flux determination and optimal metabolic network design.

Authors:  Brett A Boghigian; Hai Shi; Kyongbum Lee; Blaine A Pfeifer
Journal:  BMC Syst Biol       Date:  2010-04-23

9.  FMM: a web server for metabolic pathway reconstruction and comparative analysis.

Authors:  Chih-Hung Chou; Wen-Chi Chang; Chih-Min Chiu; Chih-Chang Huang; Hsien-Da Huang
Journal:  Nucleic Acids Res       Date:  2009-04-28       Impact factor: 16.971

Review 10.  Applications of genome-scale metabolic reconstructions.

Authors:  Matthew A Oberhardt; Bernhard Ø Palsson; Jason A Papin
Journal:  Mol Syst Biol       Date:  2009-11-03       Impact factor: 11.429

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