Literature DB >> 18758856

Epigenetic processes in a tetraploid mammal.

Caroline Bacquet1, Takuya Imamura, Claudio A Gonzalez, Iván Conejeros, Gudrun Kausel, Thi My Anh Neildez-Nguyen, Andras Paldi, Milton H Gallardo.   

Abstract

Polyploidy has played a most important role in speciation and evolution of plants and animals. It is thought that low frequency of polyploidy in mammals is due to a dosage imbalance that would interfere with proper development in mammalian polyploids. The first tetraploid mammal, Tympanoctomys barrerae (Octodontidae), appears to be an exception to this rule. In this study we investigated X chromosome inactivation (XCI) and genomic imprinting in T. barrerae, two epigenetic processes usually involved in dosage control in mammalian genomes. The imprinting status of the Peg1 gene was determined by Peg1 allelic expression studies. The inactive X chromosome was identified on interphase nuclei by immunofluorescence using specific antisera raised against Met3H3K27 and macroH2A1. Quantitative PCR was used to compare the Peg1/Dmd ratio in T. barrerae and in its most closely related diploid species, Octomys mimax. Our data demonstrate that parental-specific silencing of at least one gene and normal X chromosomal dosage mechanism are conserved in the tetraploid genome. We hypothesize a concerted action of genetic and epigenetic mechanisms during the process of functional diploidization of this tetraploid genome.

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Year:  2008        PMID: 18758856     DOI: 10.1007/s00335-008-9131-z

Source DB:  PubMed          Journal:  Mamm Genome        ISSN: 0938-8990            Impact factor:   2.957


  37 in total

1.  Discovery of tetraploidy in a mammal.

Authors:  M H Gallardo; J W Bickham; R L Honeycutt; R A Ojeda; N Köhler
Journal:  Nature       Date:  1999-09-23       Impact factor: 49.962

2.  Did genomic imprinting and X chromosome inactivation arise from stochastic expression?

Authors:  R Ohlsson; A Paldi; J A Graves
Journal:  Trends Genet       Date:  2001-03       Impact factor: 11.639

Review 3.  Genomic imprinting: could the chromatin structure be the driving force?

Authors:  Andras Paldi
Journal:  Curr Top Dev Biol       Date:  2003       Impact factor: 4.897

Review 4.  The advantages and disadvantages of being polyploid.

Authors:  Luca Comai
Journal:  Nat Rev Genet       Date:  2005-11       Impact factor: 53.242

Review 5.  Dosage balance in gene regulation: biological implications.

Authors:  James A Birchler; Nicole C Riddle; Donald L Auger; Reiner A Veitia
Journal:  Trends Genet       Date:  2005-04       Impact factor: 11.639

Review 6.  Novel patterns of gene expression in polyploid plants.

Authors:  Keith L Adams; Jonathan F Wendel
Journal:  Trends Genet       Date:  2005-10       Impact factor: 11.639

7.  Analysis of Peg1/Mest imprinting in the mouse.

Authors:  M Reule; R Krause; M Hemberger; R Fundele
Journal:  Dev Genes Evol       Date:  1998-05       Impact factor: 0.900

8.  Genetic and epigenetic incompatibilities underlie hybrid dysgenesis in Peromyscus.

Authors:  P B Vrana; J A Fossella; P Matteson; T del Rio; M J O'Neill; S M Tilghman
Journal:  Nat Genet       Date:  2000-05       Impact factor: 38.330

9.  Gametogenesis and nucleotypic effects in the tetraploid red vizcacha rat, Tympanoctomys barrerae (Rodentia, Octodontidae).

Authors:  Milton H Gallardo; Orlando Garrido; Raúl Bahamonde; Marcelo González
Journal:  Biol Res       Date:  2004       Impact factor: 5.612

10.  Loss-of-imprinting of Peg1 in mouse interspecies hybrids is correlated with altered growth.

Authors:  Wei Shi; Louis Lefebvre; Yang Yu; Sabine Otto; Antje Krella; Annie Orth; Reinald Fundele
Journal:  Genesis       Date:  2004-05       Impact factor: 2.487

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  4 in total

1.  Tetraploid Embryonic Stem Cells Maintain Pluripotency and Differentiation Potency into Three Germ Layers.

Authors:  Hiroyuki Imai; Kiyoshi Kano; Wataru Fujii; Ken Takasawa; Shoichi Wakitani; Masato Hiyama; Koichiro Nishino; Ken Takeshi Kusakabe; Yasuo Kiso
Journal:  PLoS One       Date:  2015-06-19       Impact factor: 3.240

2.  Strand-specific CpG hemimethylation, a novel epigenetic modification functional for genomic imprinting.

Authors:  Iris Patiño-Parrado; Álvaro Gómez-Jiménez; Noelia López-Sánchez; José M Frade
Journal:  Nucleic Acids Res       Date:  2017-09-06       Impact factor: 16.971

3.  Evolution of the Largest Mammalian Genome.

Authors:  Ben J Evans; Nathan S Upham; Goeffrey B Golding; Ricardo A Ojeda; Agustina A Ojeda
Journal:  Genome Biol Evol       Date:  2017-06-01       Impact factor: 3.416

4.  Naked Mole Rat Induced Pluripotent Stem Cells and Their Contribution to Interspecific Chimera.

Authors:  Sang-Goo Lee; Aleksei E Mikhalchenko; Sun Hee Yim; Alexei V Lobanov; Jin-Kyu Park; Kwang-Hwan Choi; Roderick T Bronson; Chang-Kyu Lee; Thomas J Park; Vadim N Gladyshev
Journal:  Stem Cell Reports       Date:  2017-10-26       Impact factor: 7.765

  4 in total

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